Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p050631 Quercus lobata HOM05D009691 ORTHO05D011809 2.7e-33 144.8 76 100.0
Haze_25005 Corylus avellana HOM05D009691 ORTHO05D011809 8.9e-13 76.6 82 59.8
Potri.007G086400 Populus trichocarpa HOM05D009691 ORTHO05D011809 4.4e-12 74.3 83 56.6
CiPaw.04G094900 Carya illinoinensis HOM05D018028 ORTHO05D015053 5.8e-12 73.9 70 71.4
Thecc.01G109000 Theobroma cacao HOM05D009691 ORTHO05D011809 2.2e-11 72.0 78 61.5
Potri.005G081100 Populus trichocarpa HOM05D009691 ORTHO05D011809 1.9e-10 68.9 73 58.9
Phvul.001G249700 Phaseolus vulgaris HOM05D009691 ORTHO05D011809 2.4e-10 68.6 57 63.2
Glyma.18G020300 Glycine max HOM05D009691 ORTHO05D011809 7.1e-10 67.0 57 66.7
Glyma.11G236700 Glycine max HOM05D009691 ORTHO05D011809 2.7e-09 65.1 57 66.7
Sabra07G0071500 Salix brachista HOM05D009691 ORTHO05D011809 2.7e-09 65.1 66 62.1
TAR628G1681 Trochodendron aralioides HOM05D009691 ORTHO05D011809 3.5e-09 64.7 66 56.1
Gohir.A11G197042 Gossypium hirsutum HOM05D009691 ORTHO05D011809 1.3e-08 62.8 71 59.2
Lj6g0009074 Lotus japonicus HOM05D009691 ORTHO05D011809 1.3e-08 62.8 55 58.2
Gohir.D11G225500 Gossypium hirsutum HOM05D009691 ORTHO05D011809 1.7e-08 62.4 71 59.2
Gorai.007G243000 Gossypium raimondii HOM05D009691 ORTHO05D011809 1.7e-08 62.4 71 59.2
RcHm_v2.0_Chr2g0115661 Rosa chinensis HOM05D018028 ORTHO05D015053 5.1e-08 60.8 68 54.4
Sabra05G0066400 Salix brachista HOM05D009691 ORTHO05D011809 1.5e-07 59.3 66 53.0
Nn5g28980 Nelumbo nucifera HOM05D056647 ORTHO05D011809 3.3e-07 58.2 70 50.0
FvH4_1g21780 Fragaria vesca HOM05D018028 ORTHO05D015053 4.3e-07 57.8 68 51.5
FAN19G2900 Fragaria x ananassa HOM05D018028 ORTHO05D015053 4.3e-07 57.8 68 51.5
FAN23G1944 Fragaria x ananassa HOM05D018028 ORTHO05D015053 4.3e-07 57.8 68 51.5
Cpa.g.sc231.13 Carica papaya HOM05D009691 ORTHO05D011809 5.6e-07 57.4 56 53.6
FAN26G2362 Fragaria x ananassa HOM05D018028 ORTHO05D015053 2.1e-06 55.5 66 50.0
FAN26G2496 Fragaria x ananassa HOM05D018028 ORTHO05D015053 2.1e-06 55.5 68 50.0
Gohir.D03G044600 Gossypium hirsutum HOM05D009691 ORTHO05D011809 3.6e-06 54.7 56 57.1
Gorai.003G045600 Gossypium raimondii HOM05D009691 ORTHO05D011809 3.6e-06 54.7 56 57.1
Psat5g088240 Pisum sativum HOM05D009691 ORTHO05D011809 3.6e-06 54.7 66 53.0


User provided reference genes

Program Settings