Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.6e-183 645.2 318 100.0
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 2.1e-116 422.9 320 70.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.4e-112 409.5 318 68.2
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.2e-111 407.1 316 70.3
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 8.7e-110 401.0 317 68.8
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 1.5e-109 400.2 315 68.3
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.9e-109 399.8 318 69.2
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.2e-108 397.1 316 67.4
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.6e-108 396.7 316 67.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 1.8e-107 393.3 324 67.3
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 4.0e-107 392.1 318 65.1
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 5.2e-107 391.7 323 65.3
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 7.6e-106 387.9 315 65.4
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 2.9e-105 386.0 320 64.7
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.1e-104 384.0 315 65.7
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.4e-104 383.6 314 64.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 2.4e-104 382.9 365 59.5
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 9.3e-104 380.9 315 65.7
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.2e-103 380.6 318 64.8
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 6.6e-102 374.8 372 56.7
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 4.3e-101 372.1 315 62.2
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.6e-100 369.0 322 63.7
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 2.4e-99 366.3 315 61.0
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 5.3e-99 365.2 314 61.1
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 9.0e-99 364.4 317 62.8
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.8e-98 361.7 316 62.7
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 9.9e-98 360.9 347 60.2
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.9e-97 359.4 313 60.7
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 3.8e-97 359.0 316 62.3
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.9e-96 356.7 328 60.1
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 4.2e-96 355.5 323 61.3
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 2.1e-95 353.2 323 60.7
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.6e-95 352.1 318 60.4
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 7.9e-95 351.3 323 60.7
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.3e-94 350.5 323 61.0
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 2.3e-94 349.7 314 59.9
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.0e-94 349.4 319 60.5
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 3.9e-94 349.0 333 60.7
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 3.9e-94 349.0 325 58.8
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 3.9e-94 349.0 315 59.4
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 5.1e-94 348.6 316 61.1
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 5.1e-94 348.6 315 62.9
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 5.1e-94 348.6 317 60.3
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 1.1e-93 347.4 323 58.5
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.5e-93 347.1 322 60.9
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 6.2e-92 341.7 317 61.2
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 8.1e-92 341.3 288 62.2
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.1e-91 340.9 321 60.7
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.4e-91 340.5 313 58.5
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.4e-91 340.5 313 58.5
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.4e-91 340.5 313 58.5
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 1.4e-91 340.5 325 57.2
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 2.4e-91 339.7 324 60.2
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 5.3e-91 338.6 311 57.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 5.3e-91 338.6 326 57.1
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 6.9e-91 338.2 323 59.8
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 9.0e-91 337.8 322 57.8
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.5e-90 337.0 316 59.8
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.4e-90 335.9 298 62.8
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 5.8e-90 335.1 279 62.0
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 9.9e-90 334.3 327 56.6
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.9e-89 332.8 322 57.1
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.9e-89 332.8 302 61.9
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 8.4e-89 331.3 321 57.3
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.4e-88 330.5 301 58.8
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 1.9e-88 330.1 316 58.2
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 7.1e-88 328.2 318 57.9
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.6e-87 327.0 317 57.7
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.8e-86 323.6 322 55.6
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.1e-85 320.9 276 63.0
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 9.6e-85 317.8 323 55.4
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.8e-84 316.2 286 61.2
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 4.8e-84 315.5 274 60.6
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.1e-83 314.3 322 57.1
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.4e-83 313.2 320 56.2
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.1e-83 312.8 234 69.2
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.5e-82 310.5 368 50.8
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 2.0e-82 310.1 320 55.3
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.3e-81 307.4 261 60.5
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 2.9e-81 306.2 216 74.1
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 5.5e-80 302.0 321 55.1
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.7e-79 299.7 295 57.3
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 8.7e-78 294.7 242 64.5
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 3.7e-76 289.3 200 72.5
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.8e-75 287.0 204 72.1
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 4.1e-75 285.8 203 73.4
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.0e-74 283.5 211 69.7
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.3e-70 270.0 236 61.4
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 6.7e-70 268.5 238 59.7
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.7e-68 263.8 312 51.3
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.1e-67 261.2 295 51.5
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 2.0e-66 256.9 308 47.7
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 2.0e-66 256.9 290 51.0
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 7.7e-66 255.0 317 50.2
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 5.0e-65 252.3 214 63.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.1e-64 251.1 238 58.4
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.1e-59 234.6 314 44.9
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.6e-58 229.9 265 46.8
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 5.0e-57 225.7 147 72.8
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 1.5e-53 214.2 301 40.2
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 1.5e-53 214.2 136 80.1
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 3.6e-47 193.0 200 55.0
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 6.1e-47 192.2 271 39.1
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 8.0e-47 191.8 250 41.2
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 1.4e-46 191.0 218 44.5
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 6.7e-46 188.7 242 49.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.3e-41 174.5 261 40.6
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 5.4e-35 152.5 106 71.7
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.0e-30 136.7 287 30.0
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.6e-29 133.7 245 37.6
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.3e-22 110.5 55 89.1
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.2e-21 108.2 101 61.4
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 9.8e-21 105.1 95 53.7
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 8.3e-20 102.1 62 79.0
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.9e-19 100.9 62 72.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.6e-18 97.8 59 74.6
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.0e-18 97.4 77 62.3
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 5.6e-16 89.4 83 63.9
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 6.8e-14 82.4 89 44.9
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.1e-11 75.1 86 54.7
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 3.9e-09 66.6 62 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.8e-07 60.5 86 43.0
Haze_25001 Corylus avellana HOM05D006522 ORTHO05D165714 5.2e-06 56.2 54 63.0


User provided reference genes

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