Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 0.0e+00 1265.4 653 100.0
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 0.0e+00 1202.2 653 94.9
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 8.4e-293 1010.0 649 80.6
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 6.2e-288 993.8 651 80.0
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 6.0e-283 977.2 651 78.5
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.0e-266 923.3 653 73.5
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.2e-262 909.8 646 73.5
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 5.1e-258 894.4 652 72.5
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.8e-256 888.6 654 72.0
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 4.2e-252 874.8 655 71.0
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 7.9e-251 870.5 660 69.1
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 8.8e-250 867.1 674 69.3
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 4.3e-249 864.8 654 70.6
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 3.7e-248 861.7 652 70.6
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.8e-247 859.4 652 69.6
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.4e-247 859.0 652 69.6
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 4.5e-246 854.7 649 69.2
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 5.9e-246 854.4 651 69.4
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 1.7e-245 852.8 666 68.2
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-244 850.1 652 68.6
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.4e-244 849.7 651 68.7
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.9e-244 849.4 682 67.7
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.2e-244 848.2 652 68.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 1.6e-243 846.3 655 69.2
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 4.7e-243 844.7 655 69.6
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.8e-242 842.8 655 68.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 3.0e-242 842.0 665 68.3
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 5.1e-242 841.3 656 68.1
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 5.7e-241 837.8 652 68.1
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.3e-240 836.6 646 67.8
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.7e-240 836.3 650 67.1
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-239 833.6 653 67.7
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 2.4e-239 832.4 655 67.5
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 2.0e-238 829.3 654 68.0
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 5.9e-238 827.8 657 68.5
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.0e-237 827.0 657 68.3
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.2e-236 822.0 648 66.8
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 4.2e-236 821.6 675 64.6
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.2e-235 820.1 651 65.7
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 2.1e-235 819.3 652 66.4
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 3.0e-234 815.5 652 66.4
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 7.4e-233 810.8 657 66.4
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 7.4e-233 810.8 657 66.4
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 2.2e-232 809.3 662 64.2
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.2e-232 809.3 653 66.2
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.8e-232 808.1 652 66.0
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 1.2e-230 803.5 677 63.5
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.0e-230 802.7 651 66.5
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 4.5e-230 801.6 663 64.7
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 8.0e-227 790.8 673 64.0
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.0e-225 786.2 672 62.5
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 9.7e-225 783.9 673 63.6
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.3e-224 783.5 647 66.5
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.7e-224 783.1 658 63.1
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 1.1e-223 780.4 662 63.9
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 1.1e-223 780.4 673 63.7
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 5.3e-223 778.1 650 64.3
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 7.0e-223 777.7 672 62.1
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.2e-221 772.7 673 63.3
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 6.5e-221 771.2 655 63.2
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 6.5e-221 771.2 663 61.7
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.5e-220 770.0 671 62.7
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.9e-220 769.6 673 62.7
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 3.2e-220 768.8 631 65.1
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 2.3e-218 762.7 648 63.6
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 2.6e-217 759.2 650 63.5
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 7.5e-217 757.7 644 64.1
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 1.3e-216 756.9 606 68.0
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.1e-215 752.3 659 62.2
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 1.6e-214 750.0 669 60.4
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 5.9e-214 748.0 655 62.3
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.0e-213 747.3 657 61.2
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 6.6e-213 744.6 638 64.3
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 8.0e-211 737.6 658 61.2
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.3e-210 736.1 577 67.1
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 6.8e-210 734.6 652 60.9
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 7.0e-207 724.5 655 61.2
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 1.6e-206 723.4 669 60.4
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.3e-205 720.3 659 59.8
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 9.8e-201 704.1 652 59.2
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 9.8e-201 704.1 644 59.8
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 1.1e-199 700.7 643 60.2
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 3.6e-195 685.6 671 57.8
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 5.2e-194 681.8 659 57.2
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 6.4e-192 674.9 680 56.0
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.7e-190 669.5 657 58.9
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 6.0e-190 668.3 680 55.3
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.7e-189 666.8 672 55.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 2.1e-187 659.8 691 54.0
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 6.2e-187 658.3 682 54.4
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 8.1e-187 657.9 680 55.3
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 4.4e-185 652.1 680 54.7
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 8.3e-184 647.9 682 53.7
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.9e-183 646.7 686 53.4
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 2.4e-183 646.4 676 54.4
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.2e-183 646.0 472 70.3
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 9.2e-183 644.4 632 56.8
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 7.8e-182 641.3 676 54.0
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 8.9e-178 627.9 672 52.1
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.3e-149 533.5 653 49.9
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.2e-142 511.1 698 44.4
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 9.0e-138 495.0 629 46.9
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 4.6e-134 482.6 680 41.3
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 6.9e-130 468.8 701 39.9
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 7.7e-129 465.3 559 49.0
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.7e-128 464.2 306 79.7
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.7e-126 456.1 381 65.4
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 8.8e-125 451.8 650 40.9
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 2.3e-109 400.6 346 62.7
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 9.1e-106 388.7 319 64.3
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.5e-103 381.3 374 56.4
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 4.0e-85 320.1 243 66.7
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 5.2e-77 293.1 600 32.2
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 3.5e-57 227.3 247 52.6
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.1e-45 189.1 235 43.4
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 4.0e-45 187.2 327 39.1
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.3e-43 182.2 265 43.0
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 4.5e-28 130.6 357 30.8
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 7.7e-20 103.2 180 35.0
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.2e-14 85.1 88 55.7
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.2e-12 79.3 120 45.0
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 2.5e-10 71.6 208 28.4


User provided reference genes

Program Settings