Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 6.5e-57 223.8 109 100.0
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 8.0e-47 190.3 110 86.4
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 1.4e-46 189.5 110 87.3
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 3.9e-46 188.0 110 85.5
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 9.1e-43 176.8 110 80.0
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 1.6e-42 176.0 110 82.7
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 5.7e-37 157.5 94 81.9
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 4.8e-36 154.5 111 71.2
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 1.1e-35 153.3 110 73.6
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.8e-35 152.5 101 69.3
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 7.0e-35 150.6 108 65.7
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 3.5e-34 148.3 106 68.9
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 3.5e-34 148.3 101 67.3
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 3.5e-34 148.3 101 67.3
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 3.5e-34 148.3 101 67.3
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 3.5e-34 148.3 101 67.3
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 3.5e-34 148.3 101 67.3
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 3.5e-34 148.3 106 67.0
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 4.5e-34 147.9 103 68.0
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 5.9e-34 147.5 111 65.8
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.7e-33 146.0 101 68.3
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 2.2e-33 145.6 111 64.0
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 6.5e-33 144.1 111 63.1
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 1.9e-32 142.5 109 63.3
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 1.9e-32 142.5 109 62.4
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 2.5e-32 142.1 111 65.8
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 2.5e-32 142.1 111 65.8
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 3.2e-32 141.7 111 62.2
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 4.2e-32 141.4 110 64.5
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.2e-31 139.8 110 63.6
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 1.2e-31 139.8 106 60.4
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.2e-31 139.8 106 62.3
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 2.7e-31 138.7 104 63.5
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 4.7e-31 137.9 104 67.3
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 1.8e-30 136.0 104 66.3
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 3.0e-30 135.2 111 62.2
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 3.0e-30 135.2 111 60.4
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 4.0e-30 134.8 110 63.6
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 6.8e-30 134.0 119 61.3
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 1.5e-29 132.9 108 65.7
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 2.0e-29 132.5 104 64.4
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 2.0e-29 132.5 111 60.4
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 3.4e-29 131.7 104 63.5
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 9.8e-29 130.2 104 62.5
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.3e-28 129.8 106 61.3
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 2.2e-28 129.0 103 63.1
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 8.3e-28 127.1 109 57.8
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 1.8e-27 125.9 106 58.5
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 2.4e-27 125.6 104 61.5
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 3.1e-27 125.2 106 59.4
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 4.1e-27 124.8 111 62.2
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 4.1e-27 124.8 112 56.2
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 4.1e-27 124.8 112 56.2
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 5.4e-27 124.4 109 56.9
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 1.2e-26 123.2 89 66.3
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 1.6e-26 122.9 112 55.4
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 2.0e-26 122.5 105 56.2
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 5.0e-25 117.9 111 55.9
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 8.6e-25 117.1 105 57.1
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.5e-24 115.5 111 58.6
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.5e-24 115.5 111 57.7
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 4.2e-24 114.8 103 53.4
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 9.5e-24 113.6 102 52.0
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 1.2e-23 113.2 108 54.6
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 2.8e-23 112.1 110 54.5
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 3.6e-23 111.7 107 51.4
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 3.6e-23 111.7 108 57.4
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 3.6e-23 111.7 108 57.4
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 4.7e-23 111.3 110 54.5
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 8.0e-23 110.5 126 54.0
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 8.0e-23 110.5 126 54.0
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 1.4e-22 109.8 75 66.7
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 1.8e-22 109.4 107 51.4
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.8e-22 109.4 112 53.6
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 2.3e-22 109.0 107 50.5
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 2.3e-22 109.0 112 50.0
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 2.3e-22 109.0 107 51.4
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 2.3e-22 109.0 108 50.9
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 4.0e-22 108.2 124 54.8
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 4.0e-22 108.2 108 53.7
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 5.2e-22 107.8 104 50.0
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 6.8e-22 107.5 109 49.5
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 6.8e-22 107.5 107 48.6
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 6.8e-22 107.5 107 48.6
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 6.8e-22 107.5 107 48.6
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 8.9e-22 107.1 103 52.4
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 8.9e-22 107.1 104 53.8
CANSAT01G1468 Cannabis sativa HOM05D003474 ORTHO05D003971 1.2e-21 106.7 109 54.1
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 1.5e-21 106.3 103 52.4
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 2.0e-21 105.9 107 48.6
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 2.0e-21 105.9 110 51.8
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.6e-21 105.5 103 49.5
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.6e-21 105.5 103 49.5
CANSAT01G0924 Cannabis sativa HOM05D003474 ORTHO05D003971 3.4e-21 105.1 109 52.3
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 3.4e-21 105.1 102 52.9
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 3.4e-21 105.1 102 52.9
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 3.4e-21 105.1 102 52.9
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.4e-21 105.1 103 49.5
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.4e-21 105.1 103 49.5
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 7.5e-21 104.0 107 48.6
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 9.8e-21 103.6 110 45.5
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 9.8e-21 103.6 102 52.0
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 1.3e-20 103.2 109 49.5
ClCG01G018790 Citrullus lanatus HOM05D003474 ORTHO05D003971 1.7e-20 102.8 113 49.6
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 1.7e-20 102.8 107 50.5
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 2.2e-20 102.4 109 45.9
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 2.2e-20 102.4 109 45.9
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 2.8e-20 102.1 109 48.6
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 2.8e-20 102.1 105 51.4
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 3.7e-20 101.7 101 53.5
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 3.7e-20 101.7 107 50.5
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 4.9e-20 101.3 103 50.5
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 4.9e-20 101.3 101 53.5
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 4.9e-20 101.3 103 47.6
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 6.3e-20 100.9 103 50.5
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 6.3e-20 100.9 104 52.9
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 8.3e-20 100.5 105 49.5
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 8.3e-20 100.5 105 52.4
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 1.4e-19 99.8 109 44.0
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 1.4e-19 99.8 105 49.5
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 1.8e-19 99.4 109 45.0
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 1.8e-19 99.4 108 48.1
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 2.4e-19 99.0 103 45.6
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 2.4e-19 99.0 104 51.0
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 3.1e-19 98.6 109 48.6
Medtr3g087280 Medicago truncatula HOM05D003474 ORTHO05D003971 3.1e-19 98.6 105 48.6
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 3.1e-19 98.6 106 48.1
Psat5g089800 Pisum sativum HOM05D003474 ORTHO05D003971 4.1e-19 98.2 105 48.6
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 4.1e-19 98.2 111 49.5
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 5.4e-19 97.8 101 52.5
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 5.4e-19 97.8 101 52.5
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 9.2e-19 97.1 105 46.7
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 1.2e-18 96.7 105 48.6
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 1.2e-18 96.7 110 51.8
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.2e-18 96.7 102 51.0
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 1.2e-18 96.7 106 48.1
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 1.6e-18 96.3 109 45.9
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 1.6e-18 96.3 125 42.4
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 2.0e-18 95.9 83 57.8
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 2.7e-18 95.5 104 47.1
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 3.5e-18 95.1 83 54.2
TPR.G17829 Trifolium pratense HOM05D003474 ORTHO05D003971 3.5e-18 95.1 105 46.7
TPR.G17835 Trifolium pratense HOM05D003474 ORTHO05D003971 3.5e-18 95.1 105 48.6
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 4.5e-18 94.7 105 46.7
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 4.5e-18 94.7 105 47.6
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 5.9e-18 94.4 105 46.7
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 7.8e-18 94.0 105 53.3
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 1.0e-17 93.6 105 46.7
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 1.7e-17 92.8 110 52.7
Lalb_Chr23g0277351 Lupinus albus HOM05D003474 ORTHO05D003971 1.7e-17 92.8 110 49.1
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 2.3e-17 92.4 105 47.6
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 2.9e-17 92.0 105 49.5
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 3.8e-17 91.7 102 47.1
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 3.8e-17 91.7 105 48.6
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 3.8e-17 91.7 105 44.8
Glyma.18G017500 Glycine max HOM05D003474 ORTHO05D003971 5.0e-17 91.3 105 50.5
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 6.6e-17 90.9 106 49.1
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 3.3e-16 88.6 84 50.0
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 4.3e-16 88.2 107 45.8
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 4.3e-16 88.2 105 42.9
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 4.3e-16 88.2 107 44.9
Lalb_Chr08g0231071 Lupinus albus HOM05D003474 ORTHO05D003971 7.3e-16 87.4 111 48.6
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 9.5e-16 87.0 106 49.1
CANSAT73G0001 Cannabis sativa HOM05D003474 ORTHO05D003971 2.8e-15 85.5 114 47.4
TPR.G17838 Trifolium pratense HOM05D003474 ORTHO05D003971 2.8e-15 85.5 82 51.2
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 4.7e-15 84.7 111 44.1
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 1.2e-13 80.1 101 42.6
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 2.0e-13 79.3 80 46.2
SalBow5G5729 Salvia bowleyana HOM05D003474 ORTHO05D003971 7.5e-13 77.4 71 49.3
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 1.4e-11 73.2 109 42.2
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 5.4e-11 71.2 76 46.1
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 9.2e-11 70.5 74 44.6
Phvul.001G251900 Phaseolus vulgaris HOM05D003474 ORTHO05D003971 5.0e-09 64.7 86 43.0
SalBow5G3492 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.9e-08 62.8 54 50.0
Medtr3g087300 Medicago truncatula HOM05D003474 ORTHO05D003971 1.2e-07 60.1 106 37.7
Zm00001eb109720 Zea mays HOM05D003474 ORTHO05D003971 6.2e-07 57.8 106 34.0


User provided reference genes

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