Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 9.3e-136 486.9 247 100.0
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 9.3e-136 486.9 247 100.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 2.4e-115 419.1 242 87.6
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 2.5e-112 409.1 249 84.3
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 2.2e-108 396.0 243 83.1
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 4.8e-108 394.8 236 85.6
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.4e-107 393.3 242 81.0
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.8e-107 392.9 247 81.4
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 2.6e-106 389.0 245 80.4
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 3.8e-105 385.2 245 80.0
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.5e-104 383.3 240 79.2
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.9e-104 382.9 242 80.2
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 2.1e-103 379.4 240 79.6
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 2.7e-103 379.0 241 79.3
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.8e-102 376.3 239 78.2
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.8e-102 376.3 239 80.3
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 5.7e-101 371.3 240 76.2
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 6.3e-100 367.9 252 75.4
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 1.4e-99 366.7 245 75.9
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 3.1e-99 365.5 224 80.8
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 7.0e-99 364.4 244 73.0
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 7.0e-99 364.4 228 81.6
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 2.0e-98 362.8 246 74.0
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 5.9e-98 361.3 237 78.1
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 5.9e-98 361.3 229 79.0
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 7.7e-98 360.9 241 77.2
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 2.2e-97 359.4 232 75.4
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 3.8e-97 358.6 203 84.2
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 3.8e-97 358.6 208 82.2
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 5.0e-97 358.2 197 86.8
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 8.5e-97 357.5 246 73.6
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.9e-96 356.3 206 84.0
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.5e-96 355.9 241 75.9
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.5e-96 355.9 235 76.2
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 2.5e-96 355.9 210 82.4
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 3.2e-96 355.5 196 86.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 5.5e-96 354.8 235 75.3
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 9.4e-96 354.0 205 83.9
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 9.4e-96 354.0 222 79.3
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 1.2e-95 353.6 267 69.3
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.7e-95 352.4 257 72.4
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 3.6e-95 352.1 224 77.7
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 4.7e-95 351.7 245 73.9
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 6.1e-95 351.3 197 85.8
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 8.0e-95 350.9 197 85.8
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.8e-94 349.7 253 73.1
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 2.6e-93 345.9 247 71.3
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 4.4e-93 345.1 240 74.2
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.4e-93 345.1 226 75.7
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 9.8e-93 344.0 225 76.9
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 9.8e-93 344.0 197 84.3
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.7e-92 343.2 218 75.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 4.8e-92 341.7 227 76.7
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 6.3e-92 341.3 211 78.7
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 8.3e-92 340.9 230 73.0
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.8e-91 339.7 197 82.7
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 2.4e-91 339.3 235 71.9
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 2.4e-91 339.3 224 76.3
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 4.1e-91 338.6 196 82.1
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 7.0e-91 337.8 249 71.9
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 9.1e-91 337.4 219 78.1
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.6e-90 336.7 208 77.9
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.6e-90 336.7 220 75.0
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.0e-90 336.3 227 74.0
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 2.7e-90 335.9 210 78.6
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 3.5e-90 335.5 242 71.5
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.0e-89 334.0 189 88.9
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.3e-89 333.6 207 76.8
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.2e-89 332.8 233 72.1
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 3.8e-89 332.0 225 73.8
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 6.5e-89 331.3 226 75.2
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.2e-88 328.9 241 69.3
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 7.2e-88 327.8 241 68.9
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 2.1e-87 326.2 227 73.6
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 2.1e-87 326.2 227 73.6
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 1.0e-86 323.9 226 75.7
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 1.4e-86 323.6 227 73.1
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 3.0e-86 322.4 227 72.7
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 4.0e-86 322.0 227 72.7
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 4.0e-86 322.0 227 72.7
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 4.0e-86 322.0 217 72.8
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 4.4e-85 318.5 203 76.4
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 4.4e-85 318.5 249 66.7
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 9.8e-85 317.4 230 71.3
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 8.3e-84 314.3 196 76.0
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.4e-83 311.6 223 74.0
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.0e-81 307.4 201 73.6
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 1.4e-75 287.0 191 71.2
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.4e-75 287.0 194 69.6
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.3e-73 280.4 201 66.7
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 2.2e-68 263.1 188 64.4
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 6.6e-65 251.5 171 75.4
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.5e-64 247.7 211 64.5
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.9e-60 236.1 237 57.0
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.9e-59 233.4 133 86.5
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.7e-57 226.9 237 56.1
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 5.6e-56 221.9 158 73.4
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 7.1e-51 204.9 159 63.5
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 8.6e-49 198.0 195 48.7
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 1.6e-47 193.7 152 57.9
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.6e-47 193.7 244 49.6
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.9e-43 180.3 138 72.5
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.2e-43 179.1 131 65.6
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 6.6e-41 171.8 193 45.1
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.5e-40 169.9 96 80.2
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.4e-38 164.1 149 63.8
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.0e-38 161.4 112 71.4
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 2.5e-32 143.3 122 58.2
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 3.3e-32 142.9 136 61.8
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 5.6e-32 142.1 115 67.0
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.1e-30 137.9 98 66.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 1.2e-29 134.4 233 34.8
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.2e-29 134.4 136 48.5
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 1.9e-27 127.1 206 36.9
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.2e-26 124.4 100 68.0
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.5e-21 107.5 69 66.7
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 2.7e-18 96.7 52 82.7
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.4e-14 84.3 51 76.5
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 4.5e-13 79.3 60 61.7
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.9e-12 76.6 55 60.0
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.8e-12 76.3 64 56.2
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 5.0e-12 75.9 51 66.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.9e-09 66.2 68 52.9
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 8.7e-09 65.1 53 67.9
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.1e-08 64.7 43 72.1


User provided reference genes

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