Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p046224 Quercus lobata HOM05D004733 ORTHO05D005925 1.7e-57 225.7 108 100.0
QL04p047829 Quercus lobata HOM05D004733 ORTHO05D005925 1.2e-42 176.4 108 82.4
CiPaw.02G018200 Carya illinoinensis HOM05D004733 ORTHO05D005925 1.5e-34 149.4 109 67.9
FvH4_1g13250 Fragaria vesca HOM05D004733 ORTHO05D005925 4.5e-34 147.9 103 66.0
RcHm_v2.0_Chr2g0101431 Rosa chinensis HOM05D004733 ORTHO05D005925 5.0e-33 144.4 103 66.0
CSS0026274 Camellia sinensis var. sinensis HOM05D004733 ORTHO05D005925 1.4e-32 142.9 109 65.1
RcHm_v2.0_Chr2g0101471 Rosa chinensis HOM05D004733 ORTHO05D005925 3.2e-32 141.7 103 64.1
Nn5g29624 Nelumbo nucifera HOM05D004733 ORTHO05D005925 4.2e-32 141.4 104 63.5
MD02G1146900 Malus domestica HOM05D004733 ORTHO05D005925 1.2e-31 139.8 104 60.6
Atru.chr3.583 Acer truncatum HOM05D004733 ORTHO05D005925 2.1e-31 139.0 109 58.7
Rhsim02G0060300 Rhododendron simsii HOM05D004733 ORTHO05D005925 7.9e-31 137.1 135 53.3
Sabra07G0021700 Salix brachista HOM05D004733 ORTHO05D005925 1.0e-30 136.7 110 57.3
TWI77G0475 Tripterygium wilfordii HOM05D004733 ORTHO05D005925 1.4e-30 136.3 102 59.8
Ciclev10024776m.g Citrus clementina HOM05D004733 ORTHO05D005925 1.8e-30 136.0 106 58.5
PGR119G1063 Punica granatum HOM05D004733 ORTHO05D005925 6.7e-30 134.0 108 56.5
Aqoxy6G01122 Aquilegia oxysepala HOM05D004733 ORTHO05D005925 8.8e-30 133.7 103 56.3
GSVIVG01018952001 Vitis vinifera HOM05D004733 ORTHO05D005925 8.8e-30 133.7 106 60.4
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 1.5e-29 132.9 101 63.4
Cfa004311 Carpinus fangiana HOM05D004733 ORTHO05D005925 2.5e-29 132.1 102 64.7
Thecc.01G034700 Theobroma cacao HOM05D004733 ORTHO05D005925 3.3e-29 131.7 106 57.5
Potri.007G024600 Populus trichocarpa HOM05D004733 ORTHO05D005925 5.7e-29 131.0 108 56.5
Lj1g0005862 Lotus japonicus HOM05D004733 ORTHO05D005925 7.4e-29 130.6 106 60.4
Ca_24849_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 1.3e-28 129.8 107 60.7
Gohir.D11G190600 Gossypium hirsutum HOM05D004733 ORTHO05D005925 2.2e-28 129.0 105 59.0
Medtr5g020190 Medicago truncatula HOM05D004733 ORTHO05D005925 2.8e-28 128.6 108 61.1
PSO541G3573 Papaver somniferum HOM05D004733 ORTHO05D005925 2.8e-28 128.6 110 53.6
Cpa.g.sc6.117 Carica papaya HOM05D004733 ORTHO05D005925 3.7e-28 128.3 105 61.0
Eucgr.I02440 Eucalyptus grandis HOM05D004733 ORTHO05D005925 3.7e-28 128.3 104 59.6
Duzib187G1802 Durio zibethinus HOM05D004733 ORTHO05D005925 4.8e-28 127.9 104 57.7
Lalb_Chr16g0377811 Lupinus albus HOM05D004733 ORTHO05D005925 4.8e-28 127.9 107 60.7
Lj4A201T52 Lonicera japonica HOM05D004733 ORTHO05D005925 1.1e-27 126.7 106 57.5
Gohir.A11G184100 Gossypium hirsutum HOM05D004733 ORTHO05D005925 1.4e-27 126.3 105 58.1
TPR.G22288 Trifolium pratense HOM05D004733 ORTHO05D005925 1.4e-27 126.3 107 56.1
CsaV3_5G036970 Cucumis sativus L. HOM05D004733 ORTHO05D005925 1.8e-27 125.9 107 56.1
Gorai.007G203100 Gossypium raimondii HOM05D004733 ORTHO05D005925 1.8e-27 125.9 105 58.1
Psat2g159520 Pisum sativum HOM05D004733 ORTHO05D005925 3.1e-27 125.2 108 60.2
Sed0013525 Sechium edule HOM05D004733 ORTHO05D005925 4.1e-27 124.8 104 54.8
CsaV3_6G008550 Cucumis sativus L. HOM05D004733 ORTHO05D005925 1.2e-26 123.2 107 55.1
Manes.02G094400 Manihot esculenta HOM05D004733 ORTHO05D005925 1.2e-26 123.2 107 56.1
Actinidia36563 Actinidia chinensis HOM05D004733 ORTHO05D005925 2.0e-26 122.5 110 58.2
Glyma.11G068600 Glycine max HOM05D004733 ORTHO05D005925 2.0e-26 122.5 107 58.9
PSO675G5282 Papaver somniferum HOM05D004733 ORTHO05D005925 2.0e-26 122.5 105 52.4
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea HOM05D004733 ORTHO05D005925 3.4e-26 121.7 107 58.9
MELO3C022270.2 Cucumis melo HOM05D004733 ORTHO05D005925 5.9e-26 120.9 107 53.3
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea HOM05D004733 ORTHO05D005925 7.7e-26 120.6 107 57.9
COL.COLO4_08906 Corchorus olitorius HOM05D004733 ORTHO05D005925 7.7e-26 120.6 106 53.8
Glyma.01G176400 Glycine max HOM05D004733 ORTHO05D005925 1.0e-25 120.2 108 57.4
CANSAT78G0304 Cannabis sativa HOM05D004733 ORTHO05D005925 1.3e-25 119.8 101 56.4
Ah.03g140900 Amaranthus hybridus HOM05D004733 ORTHO05D005925 2.9e-25 118.6 102 53.9
EL10Ac6g15557 Beta vulgaris HOM05D004733 ORTHO05D005925 2.9e-25 118.6 108 52.8
MSTRG.23523 Avicennia marina HOM05D004733 ORTHO05D005925 3.8e-25 118.2 104 54.8
Prupe.7G155300 Prunus persica HOM05D004733 ORTHO05D005925 5.0e-25 117.9 85 61.2
Dinv39990 Davidia involucrata HOM05D004733 ORTHO05D005925 6.5e-25 117.5 93 57.0
TAR625G0290 Trochodendron aralioides HOM05D004733 ORTHO05D005925 1.9e-24 115.9 90 61.1
AUR62004057 Chenopodium quinoa HOM05D004733 ORTHO05D005925 2.5e-24 115.5 106 50.0
FAN19G0915 Fragaria x ananassa HOM05D004733 ORTHO05D005925 2.5e-24 115.5 103 55.3
FAN28G2014 Fragaria x ananassa HOM05D004733 ORTHO05D005925 2.5e-24 115.5 103 55.3
AUR62007571 Chenopodium quinoa HOM05D004733 ORTHO05D005925 5.5e-24 114.4 106 50.0
Migut.H00986 Erythranthe guttata HOM05D004733 ORTHO05D005925 7.2e-24 114.0 104 54.8
Phvul.002G030700 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 7.2e-24 114.0 101 57.4
Oeu017201.1 Olea europaea HOM05D004733 ORTHO05D005925 1.2e-23 113.2 103 54.4
Hund16432 Selenicereus undatus HOM05D004733 ORTHO05D005925 1.2e-23 113.2 108 52.8
FAN23G1660 Fragaria x ananassa HOM05D004733 ORTHO05D005925 1.6e-23 112.8 103 54.4
Cc03_g11520 Coffea canephora HOM05D004733 ORTHO05D005925 3.6e-23 111.7 100 46.0
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea HOM05D004733 ORTHO05D005925 6.1e-23 110.9 107 55.1
AL2G11330 Arabidopsis lyrata HOM05D004733 ORTHO05D005925 1.4e-22 109.8 107 49.5
CARHR047390 Cardamine hirsuta HOM05D004733 ORTHO05D005925 1.4e-22 109.8 105 51.4
Hma1.2p1_0400F.1_g144360 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 2.3e-22 109.0 86 60.5
Carub.0002s0104 Capsella rubella HOM05D004733 ORTHO05D005925 3.9e-22 108.2 105 49.5
BcaC01g00457 Brassica carinata HOM05D004733 ORTHO05D005925 5.1e-22 107.8 106 50.9
C03p80050 Brassica napus HOM05D004733 ORTHO05D005925 5.1e-22 107.8 106 50.9
BolC3t20259H Brassica oleracea HOM05D004733 ORTHO05D005925 8.8e-22 107.1 106 50.9
CAN.G358.90 Capsicum annuum HOM05D004733 ORTHO05D005925 1.1e-21 106.7 107 45.8
A08p22270 Brassica napus HOM05D004733 ORTHO05D005925 2.6e-21 105.5 106 51.9
BraA08t34186Z Brassica rapa HOM05D004733 ORTHO05D005925 2.6e-21 105.5 106 51.9
Thhalv10024292m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 2.6e-21 105.5 108 50.0
DCAR_017293 Daucus carota HOM05D004733 ORTHO05D005925 3.3e-21 105.1 106 50.0
SalBow2G0826 Salvia bowleyana HOM05D004733 ORTHO05D005925 4.4e-21 104.8 104 49.0
MD15G1261100 Malus domestica HOM05D004733 ORTHO05D005925 1.7e-20 102.8 104 50.0
Nitab4.5_0000178g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 2.8e-20 102.1 116 42.2
Sp7g34280 Schrenkiella parvula HOM05D004733 ORTHO05D005925 2.8e-20 102.1 106 50.0
Solyc02g085230.3 Solanum lycopersicum HOM05D004733 ORTHO05D005925 2.8e-20 102.1 102 45.1
Sopen02g029930 Solanum pennellii HOM05D004733 ORTHO05D005925 2.8e-20 102.1 102 45.1
AT1G63810 Arabidopsis thaliana HOM05D004733 ORTHO05D005925 4.8e-20 101.3 109 45.9
THA.LOC104809497 Tarenaya hassleriana HOM05D004733 ORTHO05D005925 1.1e-19 100.1 103 50.5
ATR0665G204 Amborella trichopoda HOM05D004733 ORTHO05D005925 1.4e-19 99.8 105 47.6
Haze_15084 Corylus avellana HOM05D004733 ORTHO05D005925 6.9e-19 97.4 94 55.3
HanXRQChr09g0261511 Helianthus annuus HOM05D004733 ORTHO05D005925 1.5e-18 96.3 99 45.5
ClCG06G002580 Citrullus lanatus HOM05D004733 ORTHO05D005925 3.4e-18 95.1 107 46.7
vmacro15553 Vaccinium macrocarpon HOM05D004733 ORTHO05D005925 4.5e-18 94.7 68 63.2
HPP92_009475 Vanilla planifolia HOM05D004733 ORTHO05D005925 1.0e-17 93.6 96 51.0
C07p61800 Brassica napus HOM05D004733 ORTHO05D005925 1.7e-17 92.8 97 45.4
Nitab4.5_0001385g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 3.8e-17 91.7 110 40.9
Zm00001eb139270 Zea mays HOM05D004733 ORTHO05D005925 5.0e-17 91.3 105 42.9
Cc03_g11510 Coffea canephora HOM05D004733 ORTHO05D005925 1.1e-16 90.1 89 41.6
Sc03g0003000 Simmondsia chinensis HOM05D004733 ORTHO05D005925 1.4e-16 89.7 70 54.3
Peaxi162Scf00366g00125 Petunia axillaris HOM05D004733 ORTHO05D005925 4.2e-16 88.2 105 43.8
VMungo1215G0507 Vigna mungo HOM05D004733 ORTHO05D005925 1.4e-14 83.2 104 45.2
unitig_21.g20953 Utricularia gibba HOM05D004733 ORTHO05D005925 3.0e-14 82.0 106 42.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 5.2e-14 81.3 89 46.1
ECA232G2226 Erigeron canadensis HOM05D004733 ORTHO05D005925 8.2e-12 73.9 81 42.0
A05p29560 Brassica napus HOM05D004733 ORTHO05D005925 1.1e-11 73.6 96 39.6
A05p29770 Brassica napus HOM05D004733 ORTHO05D005925 1.1e-11 73.6 96 39.6
BcaNung05455 Brassica carinata HOM05D004733 ORTHO05D005925 5.3e-11 71.2 77 44.2
Phvul.011G118830 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 7.7e-10 67.4 100 40.0
CAN.G358.87 Capsicum annuum HOM05D004733 ORTHO05D005925 4.2e-08 61.6 95 37.9
Lsat_1_v5_gn_4_152020 Lactuca sativa HOM05D004733 ORTHO05D005925 4.2e-08 61.6 91 37.4


User provided reference genes

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