Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.2e-65 253.1 128 100.0
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.0e-37 160.2 133 68.4
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 3.4e-33 145.2 131 61.1
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 4.5e-33 144.8 129 62.8
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 5.9e-33 144.4 131 62.6
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.0e-32 141.4 134 59.0
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 1.4e-31 139.8 131 59.5
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 7.2e-31 137.5 149 59.7
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 3.0e-29 132.1 128 56.2
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.5e-28 129.8 133 57.9
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 3.3e-28 128.6 132 56.8
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.3e-28 128.6 130 59.2
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 5.7e-28 127.9 136 54.4
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.3e-27 126.7 135 55.6
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 2.2e-27 125.9 104 62.5
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 4.8e-27 124.8 128 51.6
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 8.2e-27 124.0 133 53.4
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.1e-26 123.6 135 54.1
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.4e-26 122.5 128 55.5
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 2.4e-26 122.5 132 53.0
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.1e-26 122.1 94 69.1
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 9.1e-26 120.6 125 56.8
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.5e-25 119.8 131 56.5
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-25 119.4 131 57.3
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 2.6e-25 119.0 133 52.6
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 5.9e-25 117.9 131 55.7
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 2.2e-24 115.9 124 58.1
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-24 115.9 124 58.1
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.8e-24 115.2 107 55.1
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 5.0e-24 114.8 75 76.0
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 6.5e-24 114.4 100 57.0
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-23 113.6 124 55.6
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 1.5e-23 113.2 134 50.0
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.5e-23 113.2 105 60.0
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.9e-23 112.8 124 52.4
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 2.5e-23 112.5 102 62.7
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 7.2e-23 110.9 97 62.9
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 9.4e-23 110.5 127 50.4
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 9.4e-23 110.5 124 53.2
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 9.4e-23 110.5 97 62.9
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 9.4e-23 110.5 134 53.7
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.2e-22 110.2 125 51.2
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 1.6e-22 109.8 124 55.6
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 3.6e-22 108.6 124 52.4
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 3.6e-22 108.6 124 52.4
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 4.7e-22 108.2 109 57.8
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 6.1e-22 107.8 131 54.2
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 8.0e-22 107.5 80 65.0
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 8.0e-22 107.5 69 78.3
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 8.0e-22 107.5 94 62.8
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.0e-21 107.1 134 50.0
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 1.0e-21 107.1 128 52.3
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.4e-21 106.7 139 48.9
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 1.4e-21 106.7 119 51.3
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 3.0e-21 105.5 138 47.1
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 6.7e-21 104.4 124 52.4
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 6.7e-21 104.4 96 63.5
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 8.8e-21 104.0 114 58.8
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 2.0e-20 102.8 124 53.2
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 2.0e-20 102.8 124 53.2
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 2.6e-20 102.4 72 70.8
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 2.6e-20 102.4 103 55.3
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.6e-20 102.4 132 49.2
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 3.3e-20 102.1 132 47.7
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.4e-20 101.7 98 61.2
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 4.4e-20 101.7 131 49.6
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 5.7e-20 101.3 134 48.5
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 7.4e-20 100.9 127 50.4
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 7.4e-20 100.9 133 47.4
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.7e-19 99.8 135 51.1
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 2.2e-19 99.4 133 48.9
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 2.2e-19 99.4 96 52.1
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.2e-19 99.4 133 47.4
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 2.2e-19 99.4 96 61.5
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 3.7e-19 98.6 93 60.2
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 3.7e-19 98.6 93 60.2
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 3.7e-19 98.6 134 45.5
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 8.2e-19 97.4 64 75.0
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 8.2e-19 97.4 64 75.0
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.4e-18 96.7 72 68.1
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 7.0e-18 94.4 80 63.8
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.2e-17 93.6 89 58.4
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.6e-17 93.2 61 73.8
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-17 92.8 66 71.2
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 3.5e-17 92.0 121 46.3
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 1.0e-16 90.5 132 43.9
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-15 86.7 162 40.1
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.9e-15 86.3 128 46.1
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.5e-15 85.9 139 46.8
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 2.5e-15 85.9 135 43.0
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.5e-15 85.9 133 46.6
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 7.2e-15 84.3 82 53.7
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 1.6e-14 83.2 91 56.0
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 1.6e-14 83.2 113 46.9
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 1.6e-14 83.2 132 46.2
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.6e-14 82.0 115 52.2
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 3.0e-13 79.0 132 44.7
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 5.2e-13 78.2 114 45.6
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.2e-13 78.2 133 47.4
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 6.8e-13 77.8 105 53.3
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 1.2e-12 77.0 92 45.7
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 2.0e-12 76.3 127 44.1
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 2.0e-12 76.3 127 40.2
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 3.4e-12 75.5 85 50.6
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 4.4e-12 75.1 134 41.0
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 7.5e-12 74.3 146 37.0
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 4.8e-11 71.6 137 41.6
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.1e-10 70.5 136 39.0
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 3.1e-10 68.9 124 41.9
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 4.1e-10 68.6 131 42.7
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 7.0e-10 67.8 110 38.2
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 7.0e-10 67.8 77 55.8
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.2e-09 67.0 125 44.8
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 2.7e-09 65.9 55 61.8
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 1.3e-08 63.5 78 43.6
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 2.9e-08 62.4 63 55.6
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 5.0e-08 61.6 103 41.7
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 6.5e-08 61.2 104 41.3
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 8.5e-08 60.8 114 43.0
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 9.4e-07 57.4 81 38.3


User provided reference genes

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