Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 4.5e-62 241.5 162 100.0
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.5e-51 205.3 162 87.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.3e-50 202.6 163 87.1
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 6.3e-48 194.5 163 85.9
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 7.2e-44 181.0 163 82.8
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.1e-41 173.7 162 77.2
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.1e-41 173.7 162 77.2
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.0e-41 172.9 162 79.6
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.8e-40 169.1 162 75.9
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 4.8e-40 168.3 163 78.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 8.2e-40 167.5 162 75.9
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 2.4e-39 166.0 164 78.0
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 3.1e-39 165.6 166 77.1
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 9.1e-39 164.1 162 77.2
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 9.1e-39 164.1 164 75.6
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 9.1e-39 164.1 162 77.2
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.3e-37 160.2 165 77.0
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.3e-37 160.2 167 76.6
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 3.8e-37 158.7 165 75.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.8e-37 158.7 166 74.7
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 8.5e-37 157.5 164 75.6
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.4e-36 156.8 162 72.2
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.4e-36 156.8 165 73.3
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.4e-36 156.8 165 73.3
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.9e-36 156.4 165 72.7
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.5e-36 156.0 162 76.5
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 3.2e-36 155.6 163 74.2
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 4.2e-36 155.2 168 73.8
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 5.5e-36 154.8 162 75.3
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 5.5e-36 154.8 164 75.6
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 7.2e-36 154.5 163 74.2
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 9.4e-36 154.1 137 84.7
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 9.4e-36 154.1 163 76.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.2e-35 153.7 162 74.1
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 2.1e-35 152.9 165 75.2
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 6.1e-35 151.4 167 74.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 6.1e-35 151.4 164 70.7
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.0e-34 150.6 162 72.8
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 3.9e-34 148.7 165 73.3
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 6.7e-34 147.9 162 74.1
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.1e-33 147.1 167 71.3
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.1e-33 147.1 168 70.2
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.1e-33 147.1 168 70.2
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 5.7e-33 144.8 167 72.5
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 7.4e-33 144.4 126 69.8
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 9.7e-33 144.1 165 72.1
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 9.7e-33 144.1 162 72.2
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.3e-32 143.7 163 74.2
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.7e-32 143.3 161 72.7
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.7e-32 143.3 170 68.8
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.7e-32 142.1 103 73.8
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.7e-32 142.1 168 69.6
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 6.3e-32 141.4 162 74.1
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 6.3e-32 141.4 162 69.1
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.1e-31 140.6 162 70.4
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.4e-31 140.2 163 68.7
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.4e-31 140.2 165 70.3
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.8e-31 139.8 162 72.2
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.8e-31 139.8 162 70.4
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.4e-31 139.4 163 73.0
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 2.4e-31 139.4 162 70.4
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 4.1e-31 138.7 165 70.9
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 4.1e-31 138.7 166 69.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 7.0e-31 137.9 128 82.0
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 7.0e-31 137.9 126 84.9
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 9.1e-31 137.5 114 90.4
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 9.1e-31 137.5 114 90.4
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.2e-30 137.1 99 70.7
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.6e-30 136.7 162 69.8
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.6e-30 136.7 162 69.8
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.6e-30 136.7 162 69.8
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.0e-30 136.3 164 68.3
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 2.6e-30 136.0 162 69.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 5.9e-30 134.8 132 81.1
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 2.2e-29 132.9 133 79.7
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 9.4e-28 127.5 161 70.8
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.2e-27 127.1 166 66.3
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.6e-27 126.7 126 81.0
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 3.6e-27 125.6 126 67.5
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 4.7e-27 125.2 154 69.5
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 8.0e-27 124.4 118 84.7
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.0e-26 124.0 156 70.5
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.3e-26 122.9 158 69.0
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 2.3e-26 122.9 153 65.4
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 3.3e-25 119.0 140 71.4
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 4.4e-25 118.6 161 54.0
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.1e-23 114.0 123 73.2
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.2e-22 110.5 131 71.8
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-22 110.5 99 60.6
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.3e-21 107.1 133 45.1
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.7e-21 106.7 113 75.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.1e-20 104.0 163 59.5
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.0e-18 95.9 127 46.5
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 8.8e-18 94.4 162 59.9
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 4.8e-16 88.6 124 67.7
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 6.3e-16 88.2 110 74.5
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 4.5e-14 82.0 140 57.1
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 1.5e-12 77.0 88 68.2
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.7e-11 72.8 100 40.0
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 3.0e-10 69.3 53 66.0
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 1.5e-09 67.0 130 58.5
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.0e-09 66.6 61 54.1
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 2.0e-06 56.6 33 84.8


User provided reference genes

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