Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 5.0e-143 511.9 460 100.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 4.9e-114 415.6 392 87.5
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.3e-111 406.8 402 82.8
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 2.3e-111 406.8 404 83.2
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 3.3e-110 402.9 397 81.4
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 3.3e-110 402.9 403 79.7
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.8e-109 399.8 406 78.8
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 4.0e-108 396.0 403 78.9
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.2e-106 390.2 406 78.8
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 4.9e-106 389.0 403 73.2
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 6.4e-106 388.7 408 84.3
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 8.4e-106 388.3 399 78.4
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.4e-105 386.7 385 77.7
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.6e-104 384.0 410 80.2
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.6e-104 382.5 408 80.4
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 7.9e-104 381.7 338 85.5
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.0e-103 381.3 407 73.2
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.3e-103 380.9 406 77.6
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.8e-103 380.6 407 73.5
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 8.7e-103 378.3 402 71.4
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.5e-102 376.7 408 74.8
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.6e-101 374.0 403 76.4
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.1e-101 373.6 404 79.5
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 2.0e-99 367.1 386 81.6
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 2.0e-99 367.1 397 77.8
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 2.9e-98 363.2 403 79.2
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.8e-98 362.8 239 84.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.8e-98 362.8 239 84.9
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-97 361.3 399 76.7
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.1e-97 361.3 407 71.7
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.4e-97 360.9 405 73.8
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 5.5e-97 359.0 402 73.6
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 5.5e-97 359.0 408 76.7
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 2.1e-96 357.1 411 74.7
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.7e-96 356.7 344 81.4
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 4.6e-96 355.9 401 63.3
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 7.9e-96 355.1 405 77.0
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 7.9e-96 355.1 406 74.4
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.3e-95 353.6 423 70.4
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 8.7e-95 351.7 405 77.3
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 4.3e-94 349.4 413 75.8
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 5.6e-94 349.0 412 72.6
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 9.6e-94 348.2 405 61.5
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.6e-93 347.4 419 74.5
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.1e-93 347.1 412 74.3
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 2.1e-93 347.1 408 73.5
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.7e-93 346.3 405 70.4
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 6.2e-93 345.5 207 93.7
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 8.2e-93 345.1 419 72.1
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 4.0e-92 342.8 413 68.5
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 6.9e-92 342.0 404 71.3
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 6.9e-92 342.0 409 72.9
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 9.0e-92 341.7 407 72.7
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 3.4e-91 339.7 365 82.5
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.3e-90 337.8 408 75.7
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 2.2e-90 337.0 412 62.1
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 2.2e-90 337.0 412 69.7
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.9e-90 336.7 403 72.2
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 4.9e-90 335.9 417 72.2
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.1e-89 334.7 403 78.4
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 9.3e-89 331.6 413 79.7
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 4.6e-88 329.3 385 69.4
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.0e-88 328.9 409 75.3
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 7.9e-88 328.6 404 70.8
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.8e-87 327.4 238 80.3
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 5.1e-87 325.9 401 72.1
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 1.1e-86 324.7 239 79.5
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 7.4e-86 322.0 395 72.9
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 2.1e-85 320.5 439 59.2
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 8.2e-85 318.5 413 67.1
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 9.0e-84 315.1 401 71.8
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.1e-81 308.1 433 68.4
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.9e-81 307.4 414 65.5
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.6e-80 304.3 415 74.7
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.3e-79 300.4 243 76.1
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.8e-77 293.5 243 74.5
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 2.4e-76 290.4 428 67.1
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 2.0e-75 287.3 206 78.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.0e-74 285.0 336 69.6
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.3e-74 284.6 210 79.0
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 6.5e-74 282.3 406 55.4
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 3.2e-73 280.0 159 87.4
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 7.2e-73 278.9 159 86.8
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.6e-72 277.7 237 67.5
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.0e-71 275.0 260 66.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.1e-71 272.7 209 74.6
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 7.4e-70 268.9 239 68.2
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.3e-69 268.1 147 90.5
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.2e-69 267.3 159 80.5
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 3.8e-66 256.5 159 80.5
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 4.7e-64 249.6 159 76.1
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 5.2e-63 246.1 159 74.2
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 5.2e-63 246.1 159 74.2
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 5.2e-63 246.1 159 74.2
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 5.2e-63 246.1 159 74.2
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 2.6e-62 243.8 159 73.6
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 4.4e-62 243.0 202 71.3
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 2.2e-61 240.7 201 71.1
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 3.5e-59 233.4 255 60.8
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.7e-58 231.1 243 59.7
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 6.1e-56 222.6 159 70.4
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 5.7e-54 216.1 159 67.9
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.9e-50 203.8 157 80.9
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.2e-47 193.0 158 62.0
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.2e-47 193.0 158 62.0
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-44 183.7 160 60.0
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-44 183.7 160 60.0
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 3.8e-42 176.8 152 63.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 6.1e-32 142.9 161 50.9
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 6.0e-27 126.3 161 46.6
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 8.6e-26 122.5 160 45.0
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 3.7e-21 107.1 157 43.3
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 7.3e-17 92.8 139 41.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 2.9e-13 80.9 56 71.4
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 3.5e-11 73.9 95 47.4
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 3.9e-10 70.5 110 38.2
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 5.2e-07 60.1 82 43.9
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-06 58.9 97 43.3
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 2.0e-06 58.2 101 36.6


User provided reference genes

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