Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p044722 Quercus lobata HOM05D000003 ORTHO05D000167 8.5e-57 223.4 109 100.0
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 4.5e-26 121.3 102 52.9
QL07p015398 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-24 115.9 99 51.5
QL02p081060 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-24 115.5 93 57.0
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 8.0e-23 110.5 97 49.5
QL02p011178 Quercus lobata HOM05D001870 ORTHO05D001797 6.8e-22 107.5 93 55.9
QL07p030179 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-21 105.5 98 51.0
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 4.4e-21 104.8 93 52.7
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 4.9e-20 101.3 103 46.6
QL05p011804 Quercus lobata HOM05D000003 ORTHO05D000167 7.0e-19 97.4 100 52.0
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 4.5e-18 94.7 97 45.4
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 5.9e-18 94.4 93 50.5
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 1.7e-17 92.8 103 49.5
QL09p052274 Quercus lobata HOM05D000021 ORTHO05D000010 4.3e-16 88.2 82 52.4
QL04p086866 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-15 86.7 86 48.8
QL05p002207 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-15 86.7 87 47.1
QL07p015088 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-15 85.9 87 47.1
QL03p050960 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-12 75.1 56 66.1
QL11p012814 Quercus lobata HOM05D000003 ORTHO05D000167 8.3e-12 73.9 87 39.1
QL03p051530 Quercus lobata HOM05D000003 ORTHO05D000167 4.1e-11 71.6 101 40.6
QL06p011527 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-10 69.3 90 38.9
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 6.0e-10 67.8 89 36.0
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 6.0e-10 67.8 89 37.1
QL04p037951 Quercus lobata HOM05D000003 ORTHO05D000167 7.8e-10 67.4 56 57.1
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-09 66.2 96 37.5
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 3.9e-09 65.1 81 34.6
TWI18G1127 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.9e-09 65.1 91 38.5
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 5.0e-09 64.7 89 37.1
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-09 64.7 81 37.0
QL04p096329 Quercus lobata HOM05D000003 ORTHO05D000167 8.6e-09 63.9 81 37.0
QL11p056495 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.5 90 33.3
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-08 63.2 89 34.8
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-08 63.2 89 36.0
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-08 63.2 89 34.8
QL11p013009 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-08 62.8 81 38.3
QL11p050287 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-08 62.8 81 35.8
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 2.5e-08 62.4 80 37.5
QL03p019718 Quercus lobata HOM05D000003 ORTHO05D000167 3.3e-08 62.0 86 36.0
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 3.3e-08 62.0 87 34.5
QL10p042493 Quercus lobata HOM05D000003 ORTHO05D000167 3.3e-08 62.0 80 35.0
QL01p014938 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-08 61.6 81 37.0
QL07p003002 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-08 61.6 55 52.7
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-08 61.6 90 31.1
QL11p012871 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-08 61.6 71 40.8
PSO591G0198 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-08 61.2 81 37.0
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-08 61.2 82 35.4
Atru.chr2.570 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-08 60.8 96 34.4
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-08 60.8 101 32.7
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.3e-08 60.8 87 34.5
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.3e-08 60.8 94 34.0
CANSAT78G2022 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-08 60.5 91 36.3
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 9.5e-08 60.5 80 37.5
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-08 60.5 112 30.4
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.2e-07 60.1 90 30.0
QL04p012103 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-07 60.1 59 47.5
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-07 59.7 79 32.9
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-07 59.7 94 33.0
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-07 59.7 94 33.0
PSO063G7278 Papaver somniferum HOM05D003407 ORTHO05D001026 3.6e-07 58.5 90 36.7
PSO170G4620 Papaver somniferum HOM05D003407 ORTHO05D001026 3.6e-07 58.5 80 38.8
QL07p011546 Quercus lobata HOM05D000003 ORTHO05D000167 3.6e-07 58.5 77 28.6
SEGI_30616 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 3.6e-07 58.5 91 31.9
CANSAT56G2130 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-07 58.2 99 32.3
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 4.7e-07 58.2 89 33.7
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 6.2e-07 57.8 95 32.6
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 57.8 88 30.7
QL02p100702 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 57.8 54 50.0
QL03p015078 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 57.8 87 31.0
QL04p013142 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 57.8 87 33.3
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 57.8 112 28.6
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 57.8 90 28.9
PSO210G3125 Papaver somniferum HOM05D003407 ORTHO05D001026 8.0e-07 57.4 101 37.6
Prupe.2G082600 Prunus persica HOM05D000003 ORTHO05D000167 8.0e-07 57.4 92 32.6
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 8.0e-07 57.4 86 32.6
CANSAT78G2353 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.0 100 31.0
QL07p013392 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.0 56 46.4
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.0 81 32.1
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.0 88 26.1
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-06 57.0 79 40.5
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-06 57.0 79 40.5
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.4e-06 56.6 94 29.8
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 1.4e-06 56.6 89 32.6
PSO541G1810 Papaver somniferum HOM05D003407 ORTHO05D001026 1.4e-06 56.6 90 33.3
PSO675G9211 Papaver somniferum HOM05D003407 ORTHO05D001026 1.4e-06 56.6 85 35.3
QL01p048703 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-06 56.6 75 33.3
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 56.6 97 30.9
QL02p078418 Quercus lobata HOM05D000038 ORTHO05D000423 1.4e-06 56.6 87 35.6
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-06 56.6 82 32.9
QL10p031903 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 56.6 81 35.8
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.8e-06 56.2 94 29.8
PSO675G8019 Papaver somniferum HOM05D003407 ORTHO05D001026 1.8e-06 56.2 80 32.5
Prupe.4G143500 Prunus persica HOM05D000003 ORTHO05D000167 1.8e-06 56.2 72 38.9
QL04p048752 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-06 56.2 91 29.7
TAR256G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 1.8e-06 56.2 92 31.5
Atru.chr6.787 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 55.8 79 41.8
MSTRG.22439 Avicennia marina HOM05D000042 ORTHO05D000167 2.3e-06 55.8 89 34.8
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-06 55.8 79 36.7
QL04p079912 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-06 55.8 99 30.3
QL05p019033 Quercus lobata HOM05D000009 ORTHO05D000008 2.3e-06 55.8 87 31.0
CSS0014223 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.1e-06 55.5 90 31.1
CSS0046159 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.1e-06 55.5 90 31.1
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.1e-06 55.5 101 31.7
Nn4g22746 Nelumbo nucifera HOM05D015489 ORTHO05D000167 3.1e-06 55.5 88 37.5
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 3.1e-06 55.5 89 29.2
CANSAT01G1630 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-06 55.1 95 29.5
CANSAT21G0502 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-06 55.1 99 31.3
Ciclev10027161m.g Citrus clementina HOM05D000003 ORTHO05D000167 4.0e-06 55.1 87 33.3
QL02p023292 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-06 55.1 84 33.3
QL06p015708 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-06 55.1 56 44.6
QL10p029361 Quercus lobata HOM05D000003 ORTHO05D011877 4.0e-06 55.1 95 28.4
Haze_08483 Corylus avellana HOM05D042742 ORTHO05D000167 5.2e-06 54.7 87 32.2
PSO421G0243 Papaver somniferum HOM05D003407 ORTHO05D001026 5.2e-06 54.7 85 37.6
QL05p005727 Quercus lobata HOM05D000432 ORTHO05D000320 5.2e-06 54.7 54 46.3
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 6.8e-06 54.3 89 33.7
CSS0031820 Camellia sinensis var. sinensis HOM05D000698 ORTHO05D000004 6.8e-06 54.3 87 29.9
PSO210G3029 Papaver somniferum HOM05D003407 ORTHO05D001026 6.8e-06 54.3 82 36.6
PSO675G6261 Papaver somniferum HOM05D003407 ORTHO05D001026 6.8e-06 54.3 90 35.6
RcHm_v2.0_Chr4g0417671 Rosa chinensis HOM05D000003 ORTHO05D000004 6.8e-06 54.3 99 29.3
QL04p048956 Quercus lobata HOM05D000003 ORTHO05D000167 8.9e-06 53.9 93 25.8
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 8.9e-06 53.9 65 38.5
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 8.9e-06 53.9 87 32.2


User provided reference genes

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