Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 5.9e-86 320.9 164 100.0
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 4.2e-68 261.5 164 79.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 2.9e-61 238.8 166 76.5
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.6e-54 216.5 165 66.1
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 2.9e-53 212.2 163 66.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.5e-52 209.9 165 67.3
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 7.2e-52 207.6 163 66.3
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 2.8e-51 205.7 167 65.3
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.2e-49 200.3 168 62.5
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 2.0e-49 199.5 163 63.2
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.4e-49 198.4 165 64.8
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 7.5e-49 197.6 172 63.4
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.1e-47 193.7 165 63.0
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-47 193.7 166 59.6
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.8e-47 193.0 166 59.0
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.1e-47 191.8 166 57.8
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 2.7e-46 189.1 165 63.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.0e-45 187.2 164 62.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 8.6e-45 184.1 164 56.7
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.5e-44 183.3 174 55.7
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 2.5e-44 182.6 164 57.9
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.3e-44 181.0 172 55.8
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 7.3e-44 181.0 152 62.5
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 8.0e-43 177.6 174 54.0
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.8e-42 176.4 167 55.7
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 2.3e-42 176.0 160 58.1
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 4.0e-42 175.3 164 57.3
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 6.8e-42 174.5 166 56.0
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 9.8e-41 170.6 161 56.5
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 6.4e-40 167.9 169 53.3
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 6.4e-40 167.9 164 51.8
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 8.3e-40 167.5 167 53.9
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.1e-39 167.2 164 56.1
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.2e-38 163.7 160 55.0
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.6e-38 163.3 168 51.2
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.6e-38 163.3 131 66.4
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 4.6e-38 161.8 126 66.7
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.3e-37 160.2 154 56.5
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 6.6e-37 157.9 165 53.3
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 8.6e-37 157.5 165 52.7
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 8.6e-37 157.5 164 53.0
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.5e-36 156.8 163 52.1
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.5e-36 156.8 172 52.9
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 3.3e-36 155.6 165 50.3
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 3.3e-36 155.6 164 52.4
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.2e-35 151.4 134 62.7
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 8.0e-35 151.0 153 53.6
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 1.8e-34 149.8 156 53.8
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 1.5e-33 146.7 115 65.2
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 4.9e-32 141.7 190 46.8
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 3.2e-31 139.0 167 49.1
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 5.4e-31 138.3 158 48.1
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.6e-30 136.7 155 49.7
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 4.6e-30 135.2 155 49.7
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.0e-29 134.0 160 49.4
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 5.0e-29 131.7 178 44.9
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.1e-28 130.6 155 47.7
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 2.5e-28 129.4 151 47.7
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 2.5e-28 129.4 166 48.8
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 4.3e-28 128.6 165 46.7
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 5.6e-28 128.3 151 44.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 5.6e-28 128.3 130 53.1
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 6.8e-26 121.3 135 49.6
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.2e-25 120.6 135 46.7
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.0e-25 119.8 144 46.5
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 1.3e-24 117.1 135 47.4
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 1.3e-24 117.1 104 56.7
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.7e-24 116.7 136 47.8
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.7e-24 116.7 170 47.1
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 3.2e-23 112.5 114 53.5
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 4.1e-23 112.1 136 47.1
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.7e-22 109.4 112 50.0
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.8e-22 107.8 96 61.5
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 3.0e-21 105.9 141 45.4
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.9e-20 103.2 163 40.5
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 5.6e-20 101.7 118 47.5
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.4e-18 97.1 121 47.9
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.5e-17 93.6 81 58.0
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 3.4e-17 92.4 160 39.4
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.1e-12 77.4 121 38.8
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 9.9e-09 64.3 116 37.1


User provided reference genes

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