Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 9.7e-65 250.4 163 100.0
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.8e-32 142.5 166 71.1
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.8e-32 142.5 166 71.1
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 3.1e-31 139.0 172 67.4
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 4.1e-31 138.7 162 72.2
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 2.7e-30 136.0 156 67.3
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 4.5e-30 135.2 171 69.6
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 7.7e-30 134.4 165 69.7
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.3e-29 133.7 156 64.1
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 1.5e-28 130.2 172 65.7
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 1.5e-28 130.2 172 66.3
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.5e-28 129.4 156 63.5
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 4.2e-28 128.6 162 63.6
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 9.5e-28 127.5 160 67.5
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 2.1e-27 126.3 172 63.4
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 2.8e-27 125.9 169 65.7
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 4.7e-27 125.2 157 66.2
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 4.7e-27 125.2 164 67.7
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.4e-26 123.6 153 64.1
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.8e-26 123.2 162 66.0
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 4.0e-26 122.1 164 62.2
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 5.2e-26 121.7 160 63.8
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.2e-25 120.6 164 61.6
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.2e-25 120.6 137 72.3
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 1.5e-25 120.2 157 65.0
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.5e-25 120.2 169 63.9
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 2.0e-25 119.8 157 64.3
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.0e-25 119.8 148 63.5
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 4.4e-25 118.6 157 65.0
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 4.4e-25 118.6 157 65.0
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 4.4e-25 118.6 155 67.1
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 5.7e-25 118.2 156 67.9
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 7.5e-25 117.9 165 61.2
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 9.8e-25 117.5 117 72.6
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.3e-24 117.1 165 63.0
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 2.8e-24 115.9 139 64.7
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.8e-24 115.9 158 63.3
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 4.9e-24 115.2 157 64.3
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 4.9e-24 115.2 165 56.4
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 6.3e-24 114.8 129 72.9
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 8.3e-24 114.4 160 62.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.4e-23 113.6 158 63.3
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.8e-23 113.2 158 63.3
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.8e-23 113.2 158 67.1
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.8e-23 113.2 156 63.5
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 2.4e-23 112.8 216 52.3
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 4.1e-23 112.1 163 64.4
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 9.2e-23 110.9 165 59.4
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 9.2e-23 110.9 165 59.4
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 1.2e-22 110.5 165 54.5
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.2e-22 110.5 129 69.0
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.6e-22 110.2 168 60.1
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 4.5e-22 108.6 123 74.0
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 7.8e-22 107.8 157 61.1
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 1.0e-21 107.5 163 59.5
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.3e-21 107.1 147 66.0
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 2.3e-21 106.3 171 62.0
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 2.9e-21 105.9 146 64.4
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 6.6e-21 104.8 159 63.5
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 6.6e-21 104.8 168 56.5
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 8.6e-21 104.4 170 57.6
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.1e-20 104.0 163 59.5
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.5e-20 102.8 172 58.7
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.5e-20 102.8 172 58.1
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 5.6e-20 101.7 157 63.1
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 7.3e-20 101.3 158 59.5
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.5e-20 100.9 172 58.7
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.8e-19 99.4 171 59.1
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 4.7e-19 98.6 140 63.6
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 8.0e-19 97.8 119 68.1
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.0e-18 97.4 159 60.4
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.0e-18 97.4 171 59.1
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.4e-18 97.1 168 57.7
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.4e-18 97.1 134 64.9
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.4e-18 97.1 170 57.1
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.3e-18 96.3 168 57.1
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.0e-18 95.5 134 64.2
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 6.8e-18 94.7 166 57.2
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 8.9e-18 94.4 134 63.4
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 5.8e-17 91.7 119 64.7
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 9.8e-17 90.9 171 58.5
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 1.7e-16 90.1 173 57.2
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 2.2e-16 89.7 172 55.8
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.2e-16 89.7 141 60.3
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 2.4e-15 86.3 128 65.6
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 3.2e-15 85.9 156 55.8
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.1e-15 85.5 141 59.6
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 5.4e-15 85.1 150 57.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 5.4e-15 85.1 124 62.9
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 3.5e-14 82.4 132 47.0
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.3e-13 80.5 157 54.1
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 3.0e-13 79.3 100 73.0
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.6e-13 78.2 137 55.5
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.5e-12 77.0 123 52.0
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 8.0e-11 71.2 110 65.5
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 8.0e-11 71.2 134 54.5
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 2.3e-10 69.7 170 51.8
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 3.1e-10 69.3 128 58.6
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 9.8e-09 64.3 128 50.0
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.3e-08 63.9 162 50.0
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 1.2e-06 57.4 143 49.0


User provided reference genes

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