Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 5.8e-84 314.3 174 100.0
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 2.2e-59 232.6 173 75.1
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 9.7e-55 217.2 172 73.3
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 3.4e-52 208.8 173 70.5
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.7e-51 206.5 175 68.6
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 5.0e-51 204.9 173 71.1
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 2.5e-50 202.6 173 69.4
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 3.2e-50 202.2 170 68.2
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 3.6e-49 198.7 179 64.8
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 4.7e-49 198.4 173 67.6
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 6.1e-49 198.0 174 66.1
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 6.1e-49 198.0 174 66.1
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 8.0e-49 197.6 173 67.6
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.0e-48 197.2 176 66.5
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.4e-48 196.8 173 68.2
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 2.0e-47 193.0 176 61.9
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 2.6e-47 192.6 172 69.2
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 5.7e-47 191.4 176 61.4
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 9.7e-47 190.7 246 51.2
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 9.7e-47 190.7 173 66.5
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 1.3e-46 190.3 174 63.8
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 1.7e-46 189.9 172 68.6
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 4.8e-46 188.3 178 62.4
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 6.3e-46 188.0 173 63.0
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.8e-45 186.4 175 65.1
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 1.8e-45 186.4 174 62.6
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 2.4e-45 186.0 171 65.5
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 5.3e-45 184.9 172 64.5
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 5.3e-45 184.9 174 62.1
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 9.1e-45 184.1 173 59.5
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 9.1e-45 184.1 173 61.8
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 2.6e-44 182.6 170 63.5
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 2.6e-44 182.6 173 60.1
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 4.5e-44 181.8 184 60.3
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 5.9e-44 181.4 172 64.5
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 7.7e-44 181.0 184 59.2
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.7e-43 179.9 173 65.9
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 2.2e-43 179.5 175 62.3
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 8.5e-43 177.6 180 63.9
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.1e-42 177.2 176 63.1
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 3.2e-42 175.6 184 59.2
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 3.2e-42 175.6 174 61.5
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 4.2e-42 175.3 174 58.6
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 5.5e-42 174.9 175 62.3
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.2e-41 173.7 175 61.7
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.6e-41 173.3 175 60.6
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 3.6e-41 172.2 176 61.4
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 3.6e-41 172.2 190 55.8
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 4.7e-41 171.8 173 62.4
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 2.3e-40 169.5 174 58.6
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 5.7e-39 164.9 174 60.3
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 5.7e-39 164.9 177 57.6
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 7.5e-39 164.5 186 56.5
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 9.7e-39 164.1 179 56.4
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.3e-38 163.7 175 60.0
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 2.2e-38 162.9 172 55.2
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 8.2e-38 161.0 172 55.2
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.8e-37 159.8 172 58.1
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 3.1e-37 159.1 175 58.9
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.7e-35 153.3 184 52.2
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 5.0e-35 151.8 178 53.9
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 5.0e-35 151.8 172 53.5
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 5.0e-35 151.8 173 55.5
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 6.5e-35 151.4 136 64.0
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 1.1e-34 150.6 269 42.8
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 1.5e-34 150.2 169 55.6
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 3.2e-34 149.1 179 53.1
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.5e-34 148.3 169 55.0
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 4.7e-33 145.2 173 55.5
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 6.1e-33 144.8 173 54.9
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 8.0e-33 144.4 194 48.5
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 1.4e-32 143.7 170 56.5
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.8e-32 143.3 182 49.5
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.8e-32 143.3 140 62.9
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.2e-31 140.6 178 50.0
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 3.4e-31 139.0 176 51.1
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 4.4e-31 138.7 97 77.3
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 7.5e-31 137.9 176 51.1
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.3e-30 137.1 135 60.7
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 2.2e-30 136.3 179 48.6
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 2.2e-30 136.3 121 65.3
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 8.3e-30 134.4 177 50.3
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 1.1e-29 134.0 175 49.1
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.8e-29 133.3 176 48.9
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.1e-29 132.5 154 55.2
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 3.1e-29 132.5 155 53.5
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 4.1e-29 132.1 217 44.2
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 5.4e-29 131.7 172 48.3
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 2.0e-28 129.8 175 48.6
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 2.0e-28 129.8 175 48.6
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 1.0e-27 127.5 179 46.9
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 8.6e-27 124.4 177 46.3
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 8.6e-27 124.4 169 47.3
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 1.5e-26 123.6 170 48.2
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 2.5e-26 122.9 167 48.5
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 2.5e-26 122.9 173 47.4
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 9.5e-26 120.9 167 47.3
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 9.5e-26 120.9 167 47.3
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.2e-25 120.6 147 53.7
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 1.2e-23 114.0 224 41.1
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 1.5e-23 113.6 176 46.0
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 5.7e-23 111.7 170 47.1
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 3.7e-22 109.0 97 63.9
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 4.9e-22 108.6 97 62.9
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 1.3e-19 100.5 170 43.5
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 1.5e-18 97.1 180 40.6
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 3.0e-16 89.4 80 58.8
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 5.8e-15 85.1 133 48.9
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 5.8e-15 85.1 133 48.9
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 9.8e-15 84.3 176 40.3
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 8.3e-14 81.3 71 60.6
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 9.2e-13 77.8 150 43.3
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 2.3e-11 73.2 129 42.6
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 3.0e-11 72.8 84 50.0
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 2.8e-09 66.2 58 58.6
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 6.8e-08 61.6 176 34.7


User provided reference genes

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