Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 4.7e-46 187.6 99 100.0
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 2.3e-24 115.5 103 65.0
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 3.4e-20 101.7 105 51.4
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 9.8e-20 100.1 106 58.5
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 1.1e-18 96.7 107 55.1
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 3.9e-16 88.2 105 45.7
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 2.8e-14 82.0 99 47.5
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 2.3e-13 79.0 107 46.7
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 6.8e-13 77.4 106 44.3
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 9.9e-12 73.6 106 40.6
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 1.3e-11 73.2 104 46.2
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 2.2e-11 72.4 111 42.3
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 2.2e-11 72.4 104 45.2
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 2.9e-11 72.0 104 42.3
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 1.1e-10 70.1 89 47.2
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 3.2e-10 68.6 101 43.6
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 4.1e-10 68.2 107 43.0
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 5.4e-10 67.8 83 50.6
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 7.1e-10 67.4 111 42.3
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 7.1e-10 67.4 99 48.5
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 9.2e-10 67.0 101 44.6
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 1.2e-09 66.6 107 41.1
VMungo1215G2475 Vigna mungo HOM05D008334 ORTHO05D010366 1.2e-09 66.6 103 44.7
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 1.6e-09 66.2 115 40.9
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 4.6e-09 64.7 103 43.7
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 4.6e-09 64.7 107 41.1
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 4.6e-09 64.7 115 41.7
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 7.8e-09 63.9 115 40.0
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.0e-08 63.5 111 38.7
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.0e-08 63.5 110 38.2
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.0e-08 63.5 110 38.2
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 1.0e-08 63.5 107 42.1
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 1.7e-08 62.8 105 39.0
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 1.7e-08 62.8 91 44.0
Nitab4.5_0000108g0210 Nicotiana tabacum HOM05D008334 ORTHO05D010366 3.0e-08 62.0 97 43.3
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 3.9e-08 61.6 111 37.8
Gohir.A11G045200 Gossypium hirsutum HOM05D008334 ORTHO05D010366 3.9e-08 61.6 107 38.3
Gohir.D11G048700 Gossypium hirsutum HOM05D008334 ORTHO05D010366 3.9e-08 61.6 107 38.3
Gorai.007G052300 Gossypium raimondii HOM05D008334 ORTHO05D010366 3.9e-08 61.6 107 38.3
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 5.1e-08 61.2 105 43.8
VMungo0251G2655 Vigna mungo HOM05D008334 ORTHO05D010366 1.1e-07 60.1 93 46.2
Cpa.g.sc15.75 Carica papaya HOM05D008334 ORTHO05D010366 1.5e-07 59.7 99 40.4
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 1.5e-07 59.7 98 42.9
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.5e-07 59.7 105 41.0
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 1.9e-07 59.3 113 37.2
Sopen02g034820 Solanum pennellii HOM05D008334 ORTHO05D010366 1.9e-07 59.3 99 43.4
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 4.3e-07 58.2 108 40.7
Gohir.D10G094300 Gossypium hirsutum HOM05D008334 ORTHO05D010366 4.3e-07 58.2 103 41.7
Gorai.011G103700 Gossypium raimondii HOM05D008334 ORTHO05D010366 4.3e-07 58.2 103 41.7
Medtr8g078960 Medicago truncatula HOM05D008334 ORTHO05D010366 7.3e-07 57.4 92 40.2
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.6e-06 56.2 101 39.6
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.6e-06 56.2 101 39.6
arahy.Tifrunner.gnm1.ann1.HXSC1S Arachis hypogaea HOM05D008334 ORTHO05D010366 1.6e-06 56.2 107 42.1
Gohir.A10G093800 Gossypium hirsutum HOM05D008334 ORTHO05D010366 1.6e-06 56.2 103 40.8
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 2.8e-06 55.5 71 49.3
CAN.G836.22 Capsicum annuum HOM05D008334 ORTHO05D012551 2.8e-06 55.5 100 40.0
PGSC0003DMG400010112 Solanum tuberosum HOM05D008334 ORTHO05D010366 2.8e-06 55.5 101 44.6
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 3.6e-06 55.1 86 41.9
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 4.7e-06 54.7 71 50.7
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 6.2e-06 54.3 109 33.0
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 6.2e-06 54.3 99 44.4
Phvul.003G249200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 6.2e-06 54.3 91 38.5
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 8.1e-06 53.9 99 44.4
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 8.1e-06 53.9 106 41.5


User provided reference genes

Program Settings