Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 0.0e+00 1442.2 703 100.0
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.7e-275 952.6 696 70.4
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 1.3e-235 820.1 697 61.4
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 2.1e-204 716.5 728 52.9
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.9e-194 683.3 699 50.5
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 1.4e-192 677.2 697 51.2
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.9e-192 674.9 699 49.8
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 1.3e-190 670.6 699 51.5
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 1.4e-189 667.2 699 50.2
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 2.1e-188 663.3 705 50.2
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.6e-188 662.1 689 49.9
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 8.7e-187 657.9 730 48.8
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.6e-185 653.7 729 47.7
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 2.1e-185 653.3 703 49.8
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.1e-185 653.3 689 49.3
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 4.0e-184 649.0 701 50.1
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 4.5e-183 645.6 692 49.6
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 5.8e-183 645.2 716 50.4
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 7.6e-183 644.8 609 53.9
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 2.2e-182 643.3 702 49.0
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 1.5e-178 630.6 696 48.3
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 2.4e-176 623.2 702 50.3
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 1.9e-173 613.6 702 49.4
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.2e-173 612.5 702 49.3
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 9.3e-173 611.3 700 48.6
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 1.6e-172 610.5 700 48.6
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 7.9e-172 608.2 688 46.4
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 6.3e-169 598.6 715 50.1
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 1.2e-167 594.3 700 47.4
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 1.5e-167 594.0 697 46.9
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 7.6e-167 591.7 689 45.6
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 6.5e-166 588.6 634 48.9
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 8.4e-166 588.2 693 45.7
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 3.2e-165 586.3 689 45.6
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 4.2e-165 585.9 700 45.9
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 9.3e-165 584.7 689 45.9
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 3.5e-164 582.8 688 45.3
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 1.8e-160 570.5 702 45.9
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 3.1e-160 569.7 697 46.5
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 6.7e-147 525.4 699 44.1
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 3.1e-144 516.5 595 46.9
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 1.2e-143 514.6 696 41.4
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 7.7e-143 511.9 556 50.4
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 1.0e-142 511.5 697 40.2
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 5.0e-142 509.2 713 41.2
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 2.5e-141 506.9 576 47.6
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.6e-140 504.2 615 43.1
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.0e-139 501.5 687 42.2
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 2.3e-139 500.4 698 42.0
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 3.0e-139 500.0 580 46.7
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 8.8e-139 498.4 710 41.7
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 2.0e-138 497.3 698 42.1
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 1.3e-137 494.6 696 42.1
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 4.8e-137 492.7 700 41.4
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 5.9e-135 485.7 663 42.2
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 7.7e-135 485.3 631 45.3
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 2.9e-134 483.4 694 40.3
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 7.2e-133 478.8 695 40.7
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 9.4e-133 478.4 662 41.4
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 8.0e-132 475.3 707 41.4
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 1.3e-129 468.0 659 40.8
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 2.8e-129 466.8 605 43.0
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 1.1e-128 464.9 571 45.4
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 5.4e-128 462.6 691 40.5
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 2.0e-127 460.7 599 43.2
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 3.5e-127 459.9 688 40.0
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 2.2e-126 457.2 724 37.8
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 8.5e-126 455.3 699 39.9
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 1.5e-125 454.5 594 44.1
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 4.2e-125 453.0 690 39.1
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 7.2e-125 452.2 654 41.7
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 1.6e-124 451.1 697 40.0
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.0e-123 448.4 681 39.5
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 1.4e-123 448.0 694 39.5
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 4.0e-123 446.4 699 39.8
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 3.4e-122 443.4 683 39.4
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 4.1e-120 436.4 682 38.7
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 2.0e-119 434.1 745 36.8
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 3.8e-118 429.9 694 39.3
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 2.9e-113 413.7 618 39.5
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 7.3e-109 399.1 615 38.2
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 8.0e-108 395.6 510 43.1
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.5e-106 391.3 720 35.7
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 1.5e-106 391.3 696 36.9
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 1.3e-105 388.3 442 47.7
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.2e-105 387.5 573 39.1
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 7.8e-103 379.0 702 36.3
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 8.3e-97 359.0 579 38.0
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.7e-95 354.0 432 44.2
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 8.6e-94 349.0 432 44.7
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 8.4e-89 332.4 661 33.3
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 2.1e-87 327.8 414 43.7
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 3.0e-86 323.9 672 34.2
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 2.4e-83 314.3 697 32.6
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 4.0e-83 313.5 700 33.0
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 2.6e-82 310.8 700 32.9
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 3.2e-80 303.9 362 44.2
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 3.4e-74 283.9 325 49.5
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.9e-73 280.8 331 47.4
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 6.7e-62 243.0 386 39.6
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.1e-56 225.7 198 57.6
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.5e-45 188.7 369 34.4
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 3.7e-36 157.5 191 46.1
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 4.5e-34 150.6 142 57.7
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 6.3e-28 130.2 138 47.1
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.3e-21 107.8 66 75.8
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.3e-21 107.8 66 75.8
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 4.4e-21 107.5 364 26.9
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 2.2e-20 105.1 96 54.2
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 2.4e-19 101.7 565 23.2
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 9.1e-19 99.8 237 30.8
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 1.2e-15 89.4 417 25.9
SEGI_32623 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 4.0e-14 84.3 264 27.3
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 3.1e-11 74.7 46 71.7
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.4e-11 73.9 57 56.1
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.6e-10 72.4 695 21.6
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 2.7e-10 71.6 256 29.7
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.1e-08 66.2 122 34.4
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 2.1e-07 62.0 174 30.5


User provided reference genes

Program Settings