Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p043635 Quercus lobata HOM05D000155 ORTHO05D000022 5.3e-68 260.8 121 100.0
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 6.2e-24 114.4 170 35.9
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-18 96.7 167 31.7
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 1.9e-17 92.8 165 32.7
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 1.4e-15 86.7 167 31.7
QL10p064615 Quercus lobata HOM05D000155 ORTHO05D000022 7.5e-14 80.9 168 30.4
QL02p058259 Quercus lobata HOM05D000155 ORTHO05D000022 1.1e-12 77.0 150 30.0
QL93p0100_0664 Quercus lobata HOM05D000155 ORTHO05D000022 1.1e-12 77.0 150 30.0
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-11 72.0 170 29.4
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 1.0e-10 70.5 169 27.8
SGA_v2.0_scaffold147G36377 Striga asiatica HOM05D000003 ORTHO05D000022 1.0e-10 70.5 131 32.8
SHI28582 Sapria himalayana HOM05D000024 ORTHO05D000022 6.6e-10 67.8 137 32.8
SHI39529 Sapria himalayana HOM05D000024 ORTHO05D000022 1.1e-09 67.0 119 37.0
SHI47710 Sapria himalayana HOM05D000024 ORTHO05D000022 1.5e-09 66.6 116 33.6
SHI49575 Sapria himalayana HOM05D000024 ORTHO05D000022 1.9e-09 66.2 121 30.6
QL12p025692 Quercus lobata HOM05D014996 ORTHO05D000022 3.3e-09 65.5 116 34.5
RcHm_v2.0_Chr2g0127141 Rosa chinensis HOM05D000003 ORTHO05D000022 3.3e-09 65.5 163 28.2
QL01p013568 Quercus lobata HOM05D000155 ORTHO05D000022 5.6e-09 64.7 160 26.2
SHI41809 Sapria himalayana HOM05D000003 ORTHO05D000004 5.6e-09 64.7 137 27.7
QL08p041434 Quercus lobata HOM05D000419 ORTHO05D001071 7.3e-09 64.3 165 27.9
QL12p023424 Quercus lobata HOM05D002663 ORTHO05D002988 7.3e-09 64.3 98 37.8
QL10p004071 Quercus lobata HOM05D001287 ORTHO05D001226 9.5e-09 63.9 110 34.5
QL05p002397 Quercus lobata HOM05D000155 ORTHO05D000022 1.6e-08 63.2 117 35.9
QL06p023412 Quercus lobata HOM05D040955 ORTHO05D000022 1.6e-08 63.2 37 64.9
SHI41116 Sapria himalayana HOM05D000024 ORTHO05D000007 1.6e-08 63.2 129 33.3
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-08 63.2 164 29.3
SHI29016 Sapria himalayana HOM05D000003 ORTHO05D000004 2.1e-08 62.8 89 33.7
Atru.chr3.1522 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-08 62.0 166 28.3
QL08p055576 Quercus lobata HOM05D000078 ORTHO05D000007 3.6e-08 62.0 72 40.3
SHI15769 Sapria himalayana HOM05D004990 ORTHO05D000022 3.6e-08 62.0 136 28.7
SHI45359 Sapria himalayana HOM05D004990 ORTHO05D000022 3.6e-08 62.0 121 32.2
SHI53806 Sapria himalayana HOM05D004990 ORTHO05D000022 3.6e-08 62.0 84 36.9
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.7e-08 61.6 167 26.9
FvH4_2g06731 Fragaria vesca HOM05D000003 ORTHO05D020649 8.1e-08 60.8 135 28.9
SHI33415 Sapria himalayana HOM05D000024 ORTHO05D000004 8.1e-08 60.8 136 29.4
SHI36204 Sapria himalayana HOM05D000003 ORTHO05D000004 8.1e-08 60.8 136 27.9
SHI38494 Sapria himalayana HOM05D000024 ORTHO05D000007 8.1e-08 60.8 129 28.7
QL10p048631 Quercus lobata HOM05D027877 ORTHO05D000022 1.1e-07 60.5 61 45.9
SHI38779 Sapria himalayana HOM05D000155 ORTHO05D000022 1.4e-07 60.1 160 28.8
SHI46436 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-07 60.1 93 29.0
SHI50953 Sapria himalayana HOM05D004990 ORTHO05D000022 1.4e-07 60.1 82 37.8
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-07 59.7 165 25.5
QL02p075356 Quercus lobata HOM05D000155 ORTHO05D000022 1.8e-07 59.7 79 36.7
QL04p008062 Quercus lobata HOM05D000009 ORTHO05D000008 2.3e-07 59.3 97 30.9
SHI23757 Sapria himalayana HOM05D004990 ORTHO05D000022 2.3e-07 59.3 86 34.9
Atru.chr2.1642 Acer truncatum HOM05D000003 ORTHO05D000022 3.1e-07 58.9 123 29.3
MBI14_g13525_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.1e-07 58.9 144 30.6
MBI16_g05639_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.1e-07 58.9 142 28.2
SHI40350 Sapria himalayana HOM05D000003 ORTHO05D000004 3.1e-07 58.9 146 26.7
MBI16_g17459_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-07 58.5 111 29.7
MBI17_g20221_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-07 58.5 133 26.3
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-07 58.2 167 27.5
MBI04_g06615_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-07 58.2 87 29.9
QL12p008788 Quercus lobata HOM05D014996 ORTHO05D000022 5.2e-07 58.2 54 48.1
SHI43079 Sapria himalayana HOM05D004990 ORTHO05D000022 6.8e-07 57.8 122 28.7
SHI43336 Sapria himalayana HOM05D000024 ORTHO05D000007 6.8e-07 57.8 124 34.7
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.2e-06 57.0 147 29.9
QL03p062046 Quercus lobata HOM05D000155 ORTHO05D000022 1.2e-06 57.0 36 66.7
SHI41623 Sapria himalayana HOM05D000024 ORTHO05D000022 1.2e-06 57.0 103 36.9
MBI15_g39376_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.5e-06 56.6 83 32.5
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 1.5e-06 56.6 141 29.8
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 1.5e-06 56.6 141 29.8
SHI15766 Sapria himalayana HOM05D004990 ORTHO05D000022 1.5e-06 56.6 129 30.2
SHI33719 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 56.6 81 35.8
SHI41314 Sapria himalayana HOM05D000024 ORTHO05D000022 1.5e-06 56.6 97 35.1
TWI63G0844 Tripterygium wilfordii HOM05D000013 ORTHO05D000011 1.5e-06 56.6 112 33.0
MBI11_g19496_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.0e-06 56.2 80 32.5
MBI18_g23784_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 56.2 139 25.9
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 2.0e-06 56.2 83 38.6
SHI49077 Sapria himalayana HOM05D004990 ORTHO05D000022 2.0e-06 56.2 129 27.1
arahy.Tifrunner.gnm1.ann1.KPZY4F Arachis hypogaea HOM05D000003 ORTHO05D000022 2.6e-06 55.8 156 28.8
MBI14_g11704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.6e-06 55.8 84 32.1
QL06p022672 Quercus lobata HOM05D014996 ORTHO05D000022 2.6e-06 55.8 97 39.2
RcHm_v2.0_Chr7g0200931 Rosa chinensis HOM05D000003 ORTHO05D000022 2.6e-06 55.8 159 27.0
SHI25431 Sapria himalayana HOM05D000024 ORTHO05D000022 2.6e-06 55.8 78 37.2
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-06 55.5 171 24.6
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-06 55.5 159 23.9
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 3.4e-06 55.5 37 67.6
MBI16_g11026_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.5 84 31.0
MBI16_g11674_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.5 84 31.0
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.5 146 27.4
SHI33427 Sapria himalayana HOM05D000024 ORTHO05D000022 3.4e-06 55.5 143 29.4
SHI38759 Sapria himalayana HOM05D000024 ORTHO05D000022 3.4e-06 55.5 165 26.7
SHI48707 Sapria himalayana HOM05D000024 ORTHO05D000022 3.4e-06 55.5 84 35.7
AUR62014524 Chenopodium quinoa HOM05D001049 ORTHO05D005951 4.4e-06 55.1 36 66.7
MBI07_g09266_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.4e-06 55.1 86 31.4
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.4e-06 55.1 138 28.3
SHI31029 Sapria himalayana HOM05D004990 ORTHO05D000022 4.4e-06 55.1 167 26.9
SHI35637 Sapria himalayana HOM05D000024 ORTHO05D000007 4.4e-06 55.1 36 61.1
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 5.8e-06 54.7 166 26.5
Aqoxy7G01437 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 5.8e-06 54.7 57 45.6
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 5.8e-06 54.7 160 25.0
SHI35497 Sapria himalayana HOM05D000024 ORTHO05D000007 5.8e-06 54.7 131 31.3
MBI14_g26933_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.6e-06 54.3 84 31.0
MBI16_g35230_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.6e-06 54.3 62 40.3
QL04p030886 Quercus lobata HOM05D000155 ORTHO05D000022 7.6e-06 54.3 81 37.0
SHI06357 Sapria himalayana HOM05D000024 ORTHO05D000007 7.6e-06 54.3 35 60.0
SHI19694 Sapria himalayana HOM05D000024 ORTHO05D000006 7.6e-06 54.3 84 31.0
SHI31541 Sapria himalayana HOM05D000003 ORTHO05D000004 7.6e-06 54.3 36 55.6
SHI49851 Sapria himalayana HOM05D000024 ORTHO05D000022 7.6e-06 54.3 116 32.8
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 9.9e-06 53.9 171 24.0
Atru.chr8.1133 Acer truncatum HOM05D000003 ORTHO05D000022 9.9e-06 53.9 64 39.1
MBI07_g09569_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.9e-06 53.9 81 32.1
MBI19_g34996_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.9e-06 53.9 81 30.9
RcHm_v2.0_Chr7g0181271 Rosa chinensis HOM05D000003 ORTHO05D000022 9.9e-06 53.9 168 23.8
SHI25047 Sapria himalayana HOM05D000024 ORTHO05D000007 9.9e-06 53.9 92 30.4
SHI33050 Sapria himalayana HOM05D004990 ORTHO05D000022 9.9e-06 53.9 66 34.8
SHI37599 Sapria himalayana HOM05D000024 ORTHO05D000006 9.9e-06 53.9 103 36.9
SHI40374 Sapria himalayana HOM05D000024 ORTHO05D000006 9.9e-06 53.9 78 38.5
SHI43597 Sapria himalayana HOM05D000024 ORTHO05D000006 9.9e-06 53.9 35 60.0
SEGI_14797 Sequoiadendron giganteum HOM05D000067 ORTHO05D009930 9.9e-06 53.9 37 54.1


User provided reference genes

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