Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 1.7e-55 219.2 113 100.0
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 1.3e-47 193.0 113 92.0
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 1.7e-47 192.6 113 92.0
QL06p042147 Quercus lobata HOM05D008581 ORTHO05D009966 2.0e-37 159.1 109 81.7
QL06p042049 Quercus lobata HOM05D008581 ORTHO05D009966 1.2e-32 143.3 107 74.8
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 1.8e-30 136.0 113 63.7
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.1e-17 93.6 115 47.0
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 2.3e-17 92.4 120 48.3
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 2.3e-17 92.4 123 50.4
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 2.6e-16 89.0 121 47.9
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 1.2e-13 80.1 122 46.7
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 2.0e-13 79.3 118 43.2
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 4.6e-13 78.2 116 45.7
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 4.6e-13 78.2 119 43.7
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.0e-12 77.0 116 45.7
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 1.0e-12 77.0 120 45.0
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 5.0e-12 74.7 115 45.2
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 6.6e-12 74.3 117 43.6
Haze_15424 Corylus avellana HOM05D017207 ORTHO05D010689 8.6e-12 73.9 92 51.1
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.3e-11 72.0 110 45.5
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 3.3e-11 72.0 116 41.4
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 1.2e-10 70.1 115 40.9
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 1.2e-10 70.1 119 39.5
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 2.1e-10 69.3 117 42.7
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 2.8e-10 68.9 122 46.7
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 3.6e-10 68.6 129 41.1
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 2.3e-09 65.9 122 41.0
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 2.3e-09 65.9 118 41.5
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 2.3e-09 65.9 108 40.7
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 2.3e-09 65.9 108 40.7
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.1e-09 65.5 116 41.4
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.1e-09 65.5 115 40.9
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 5.2e-09 64.7 116 40.5
CiPaw.02G009100 Carya illinoinensis HOM05D015383 ORTHO05D009966 6.8e-09 64.3 122 45.1
CiPaw.01G020000 Carya illinoinensis HOM05D015383 ORTHO05D009966 8.9e-09 63.9 119 39.5
CiPaw.01G020100 Carya illinoinensis HOM05D015383 ORTHO05D009966 8.9e-09 63.9 122 41.8
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 1.2e-08 63.5 114 41.2
CiPaw.01G020700 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.0e-08 62.8 110 42.7
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 2.6e-08 62.4 114 43.0
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.4e-08 62.0 120 40.8
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.4e-08 62.0 120 40.8
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 3.4e-08 62.0 120 43.3
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 9.9e-08 60.5 119 41.2
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 9.9e-08 60.5 119 38.7
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 1.3e-07 60.1 113 37.2
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 1.3e-07 60.1 111 37.8
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 1.7e-07 59.7 120 37.5
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 1.7e-07 59.7 114 40.4
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 2.2e-07 59.3 134 34.3
ClCG01G016740 Citrullus lanatus HOM05D022436 ORTHO05D009966 6.4e-07 57.8 114 40.4
FvH4_1g15760 Fragaria vesca HOM05D018300 ORTHO05D020671 6.4e-07 57.8 111 38.7
Ah.02g124160 Amaranthus hybridus HOM05D015383 ORTHO05D009966 8.3e-07 57.4 119 40.3
MSTRG.2893 Avicennia marina HOM05D008581 ORTHO05D009966 1.4e-06 56.6 118 40.7
FAN23G0591 Fragaria x ananassa HOM05D018300 ORTHO05D020671 1.4e-06 56.6 107 36.4
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.4e-06 56.6 113 36.3
Gohir.A12G070300 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.9e-06 56.2 113 38.1
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 1.9e-06 56.2 111 40.5
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.4e-06 55.8 113 36.3
CsaV3_6G043170 Cucumis sativus L. HOM05D022436 ORTHO05D009966 4.1e-06 55.1 114 39.5
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 4.1e-06 55.1 111 36.9
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 4.1e-06 55.1 107 35.5
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 7.1e-06 54.3 118 36.4
AT2G23440 Arabidopsis thaliana HOM05D010906 ORTHO05D011864 9.2e-06 53.9 108 35.2


User provided reference genes

Program Settings