Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.4e-84 316.2 154 100.0
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 3.2e-70 268.5 143 94.4
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 9.2e-57 223.8 143 79.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 1.4e-52 209.9 143 76.9
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 8.1e-45 184.1 143 67.8
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.5e-43 179.9 142 67.6
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.9e-42 175.6 141 66.7
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 8.3e-42 174.1 144 63.9
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 2.4e-41 172.6 151 63.6
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 2.4e-41 172.6 144 63.9
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 5.1e-39 164.9 144 63.9
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 5.1e-39 164.9 144 61.8
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 9.5e-38 160.6 144 63.9
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.1e-37 159.5 144 61.8
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 2.8e-37 159.1 144 61.1
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 3.1e-36 155.6 144 60.4
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 8.9e-36 154.1 143 58.7
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.5e-35 153.3 144 60.4
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.0e-35 152.9 144 58.3
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.6e-35 152.5 144 60.4
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 5.8e-35 151.4 144 59.7
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 5.8e-35 151.4 144 60.4
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.3e-34 150.2 144 58.3
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 3.7e-34 148.7 151 54.3
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.1e-33 147.1 144 59.0
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.9e-33 146.4 144 57.6
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 4.1e-33 145.2 144 59.0
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 9.2e-33 144.1 144 57.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 2.1e-32 142.9 144 56.9
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.1e-32 142.9 144 54.9
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.7e-32 142.5 144 56.2
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 3.5e-32 142.1 144 56.9
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 7.8e-32 141.0 144 57.6
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.3e-31 139.4 151 53.6
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.0e-31 139.0 151 53.6
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 5.1e-31 138.3 150 54.7
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.1e-31 138.3 150 54.7
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 5.1e-31 138.3 144 54.9
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 8.6e-31 137.5 144 56.2
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.5e-30 136.7 143 55.2
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.5e-30 136.7 152 53.9
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.5e-30 136.0 144 54.9
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 2.5e-30 136.0 144 54.9
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 5.6e-30 134.8 142 54.9
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 7.3e-30 134.4 150 53.3
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 4.7e-29 131.7 143 54.5
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.2e-29 131.3 148 53.4
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 1.4e-28 130.2 146 55.5
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 6.8e-28 127.9 144 51.4
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 2.6e-27 125.9 145 52.4
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 3.4e-27 125.6 145 53.1
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 5.8e-27 124.8 154 51.3
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.7e-26 123.2 151 50.3
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 2.2e-26 122.9 144 51.4
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.9e-26 121.7 151 49.7
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.4e-25 120.2 146 52.7
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.2e-25 118.6 151 49.0
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.2e-25 118.6 144 51.4
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 9.3e-25 117.5 144 50.7
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 9.3e-25 117.5 143 49.0
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 1.0e-23 114.0 144 47.9
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.3e-23 113.6 149 49.0
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 3.9e-23 112.1 144 48.6
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 1.5e-22 110.2 131 48.9
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 2.5e-22 109.4 144 46.5
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.3e-22 109.0 144 50.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 3.3e-22 109.0 144 47.9
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.1e-20 104.0 151 43.7
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.4e-20 103.6 144 46.5
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 6.9e-20 101.3 150 44.7
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 6.9e-20 101.3 147 40.8
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.2e-19 100.5 144 46.5
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.5e-19 100.1 144 46.5
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.6e-19 99.4 143 45.5
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.2e-18 96.3 150 42.0
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 6.4e-18 94.7 152 44.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 1.1e-17 94.0 144 43.8
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.1e-17 94.0 144 43.8
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.1e-17 94.0 150 42.0
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.4e-17 93.6 143 43.4
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 1.4e-17 93.6 142 43.7
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.4e-17 93.6 150 38.7
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 7.1e-17 91.3 144 43.8
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 7.1e-17 91.3 144 43.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 9.3e-17 90.9 144 43.8
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.1e-16 89.7 145 43.4
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.7e-16 89.4 144 43.1
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 2.7e-16 89.4 65 64.6
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.7e-15 86.7 145 42.1
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.5e-14 83.6 145 42.1
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 2.5e-14 82.8 144 38.2
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.3e-13 80.5 150 34.7
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 6.2e-13 78.2 141 39.0
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 6.2e-13 78.2 141 40.4
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 8.1e-13 77.8 149 40.9
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.1e-12 77.4 151 39.1
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.8e-12 76.6 144 39.6
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.8e-12 76.6 141 39.0
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 4.0e-12 75.5 152 35.5
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 5.3e-12 75.1 143 37.8
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 9.0e-12 74.3 144 38.9
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.0e-11 73.2 144 37.5
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 2.0e-11 73.2 141 39.0
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 2.0e-11 73.2 141 39.0
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.9e-10 68.6 141 38.3
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 6.4e-10 68.2 145 37.2
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.1e-09 67.4 144 38.2
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.4e-09 67.0 141 37.6
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.9e-06 56.6 117 38.5
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 1.9e-06 56.6 117 38.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 2.5e-06 56.2 145 37.2


User provided reference genes

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