Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 7.1e-78 293.9 151 100.0
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 2.2e-55 219.2 161 69.6
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 3.8e-55 218.4 151 80.8
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 7.9e-53 210.7 171 65.5
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.3e-52 209.9 161 68.3
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 2.1e-50 202.6 156 64.7
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 2.8e-50 202.2 164 66.5
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 6.9e-49 197.6 147 65.3
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 6.9e-49 197.6 147 65.3
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.2e-48 196.8 130 75.4
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.2e-48 196.8 130 75.4
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 5.8e-48 194.5 134 71.6
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 5.8e-48 194.5 138 70.3
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 7.6e-48 194.1 159 62.9
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 1.0e-47 193.7 137 68.6
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.0e-47 193.7 156 63.5
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.3e-47 193.4 142 68.3
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.2e-47 192.6 116 79.3
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 2.9e-47 192.2 150 63.3
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 2.9e-47 192.2 159 60.4
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 4.9e-47 191.4 156 62.2
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.4e-46 189.9 120 75.8
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.9e-46 189.5 129 72.1
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 3.2e-46 188.7 121 73.6
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 3.2e-46 188.7 122 73.8
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 4.2e-46 188.3 122 75.4
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 5.5e-46 188.0 124 74.2
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 7.1e-46 187.6 125 68.8
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 9.3e-46 187.2 159 59.7
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 9.3e-46 187.2 145 64.8
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 1.2e-45 186.8 120 73.3
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 1.2e-45 186.8 150 62.0
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.6e-45 186.4 140 67.9
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.6e-45 186.4 121 73.6
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 1.6e-45 186.4 121 73.6
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 3.5e-45 185.3 125 68.8
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 4.6e-45 184.9 148 64.9
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 4.6e-45 184.9 144 63.2
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 6.0e-45 184.5 143 63.6
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 1.0e-44 183.7 120 72.5
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 1.3e-44 183.3 119 70.6
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 1.3e-44 183.3 125 68.0
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 1.3e-44 183.3 144 62.5
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 1.3e-44 183.3 144 62.5
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 3.0e-44 182.2 144 62.5
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 3.9e-44 181.8 141 64.5
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 3.9e-44 181.8 129 67.4
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 8.7e-44 180.6 132 62.9
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.1e-43 180.3 137 64.2
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.1e-43 180.3 181 54.7
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.1e-43 180.3 128 66.4
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 1.5e-43 179.9 144 61.1
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.5e-43 179.9 126 68.3
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.9e-43 179.5 138 60.1
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 1.9e-43 179.5 121 69.4
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 2.5e-43 179.1 120 70.8
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.3e-43 178.7 121 69.4
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 3.3e-43 178.7 140 59.3
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.3e-43 178.3 144 59.0
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 4.3e-43 178.3 202 49.5
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 5.7e-43 177.9 122 68.9
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 5.7e-43 177.9 126 69.0
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 5.7e-43 177.9 126 69.0
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 7.4e-43 177.6 144 59.0
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.3e-42 176.8 128 64.1
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.3e-42 176.8 130 63.8
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 1.6e-42 176.4 152 59.9
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.1e-42 176.0 126 67.5
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 2.8e-42 175.6 129 66.7
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 3.7e-42 175.3 109 73.4
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 3.7e-42 175.3 113 70.8
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 3.7e-42 175.3 113 70.8
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.7e-42 175.3 112 71.4
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 8.2e-42 174.1 141 60.3
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.4e-41 173.3 137 63.5
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 2.4e-41 172.6 119 68.1
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.4e-41 172.6 122 63.9
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.4e-41 172.6 125 63.2
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 9.0e-41 170.6 164 60.4
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 9.0e-41 170.6 139 59.7
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 1.2e-40 170.2 143 57.3
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 2.0e-40 169.5 112 71.4
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 2.0e-40 169.5 161 52.2
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 2.6e-40 169.1 122 65.6
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 4.5e-40 168.3 164 59.8
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 5.9e-40 167.9 137 59.1
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 5.9e-40 167.9 108 73.1
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.8e-36 156.4 160 53.1
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 3.0e-36 155.6 126 61.1
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.3e-34 150.2 128 56.2
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 1.6e-34 149.8 131 57.3
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.6e-34 149.8 95 72.6
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 6.3e-34 147.9 89 78.7
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 3.1e-33 145.6 96 69.8
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 1.1e-30 137.1 143 51.0
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 9.4e-30 134.0 102 61.8
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 4.6e-29 131.7 146 52.1
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 7.9e-29 131.0 142 50.0
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.0e-28 130.6 120 50.0
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 1.4e-28 130.2 113 53.1
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.3e-26 123.6 104 59.6
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 1.3e-26 123.6 87 63.2
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 2.2e-26 122.9 109 56.9
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 2.4e-25 119.4 74 74.3
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 9.1e-25 117.5 89 67.4
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 3.2e-22 109.0 92 53.3
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 2.1e-21 106.3 70 74.3
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.1e-19 100.5 68 76.5
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.1e-17 94.0 53 83.0
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.9e-15 85.9 52 71.2
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 1.9e-14 83.2 48 77.1
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 3.6e-13 79.0 102 40.2
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 1.4e-12 77.0 59 57.6
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.3e-12 76.3 96 47.9
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 5.3e-09 65.1 58 46.6
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 1.2e-08 63.9 83 44.6
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 2.5e-06 56.2 65 49.2


User provided reference genes

Program Settings