Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p039919 Quercus lobata HOM05D006669 ORTHO05D008440 1.3e-69 266.2 120 100.0
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 6.7e-55 217.2 120 78.3
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 3.3e-54 214.9 120 77.5
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 7.4e-54 213.8 115 81.7
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 7.4e-54 213.8 120 73.3
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 9.7e-54 213.4 120 76.7
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 2.8e-53 211.8 120 77.5
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 4.8e-53 211.1 120 75.8
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 4.8e-53 211.1 119 73.9
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 6.3e-53 210.7 120 75.0
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 8.2e-53 210.3 120 75.0
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 8.2e-53 210.3 120 75.0
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 1.1e-52 209.9 120 75.8
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 1.8e-52 209.1 120 73.3
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 3.1e-52 208.4 120 73.3
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 4.1e-52 208.0 120 72.5
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 6.9e-52 207.2 120 73.3
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 6.9e-52 207.2 119 72.3
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 3.4e-51 204.9 120 71.7
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 7.7e-51 203.8 120 71.7
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 8.5e-50 200.3 118 73.7
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 8.5e-50 200.3 118 73.7
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 8.5e-50 200.3 120 68.3
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 1.1e-49 199.9 120 69.2
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 1.1e-49 199.9 120 73.3
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 1.1e-49 199.9 120 67.5
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.4e-49 199.5 120 68.3
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.4e-49 199.5 120 68.3
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 1.9e-49 199.1 120 72.5
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 1.9e-49 199.1 120 72.5
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 2.5e-49 198.7 116 74.1
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 4.2e-49 198.0 120 72.5
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 4.2e-49 198.0 119 68.9
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 4.2e-49 198.0 119 69.7
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 1.2e-48 196.4 120 70.0
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 2.7e-48 195.3 120 67.5
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 4.6e-48 194.5 120 69.2
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 7.9e-48 193.7 119 66.4
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 1.0e-47 193.4 120 66.7
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 1.4e-47 193.0 120 62.5
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 1.4e-47 193.0 120 65.8
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 1.8e-47 192.6 118 68.6
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 3.0e-47 191.8 120 70.0
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 3.9e-47 191.4 120 66.7
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 3.9e-47 191.4 120 66.7
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 6.7e-47 190.7 121 68.6
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 6.7e-47 190.7 119 65.5
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 6.7e-47 190.7 120 63.3
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 8.8e-47 190.3 120 64.2
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 8.8e-47 190.3 120 64.2
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 1.1e-46 189.9 120 62.5
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 1.1e-46 189.9 120 63.3
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 1.1e-46 189.9 120 63.3
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 1.1e-46 189.9 120 63.3
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 1.1e-46 189.9 119 65.5
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 2.0e-46 189.1 119 65.5
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 2.5e-46 188.7 120 62.5
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 2.5e-46 188.7 119 67.2
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 3.3e-46 188.3 115 70.4
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 3.3e-46 188.3 120 64.2
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 4.3e-46 188.0 120 65.8
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 4.3e-46 188.0 109 72.5
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 5.7e-46 187.6 120 61.7
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 5.7e-46 187.6 119 63.9
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 9.7e-46 186.8 120 62.5
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 1.7e-45 186.0 120 63.3
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 1.7e-45 186.0 120 65.8
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 6.3e-45 184.1 130 60.0
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 6.3e-45 184.1 157 54.1
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 1.4e-44 183.0 123 64.2
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 1.8e-44 182.6 120 60.8
unitig_62.g23421 Utricularia gibba HOM05D006669 ORTHO05D008440 5.0e-42 174.5 119 65.5
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 6.5e-42 174.1 119 63.9
HPP92_000758 Vanilla planifolia HOM05D006669 ORTHO05D008440 6.5e-42 174.1 121 63.6
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 1.9e-41 172.6 109 63.3
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 8.8e-39 163.7 120 59.2
Manes.01G047215 Manihot esculenta HOM05D006669 ORTHO05D008440 1.1e-38 163.3 95 71.6
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 3.1e-36 155.2 139 50.4
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 1.0e-34 150.2 83 77.1
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 1.0e-34 150.2 135 51.9
Hma1.2p1_1506F.1_g287550 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 1.9e-33 146.0 85 76.5
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 5.5e-33 144.4 75 76.0
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 1.6e-32 142.9 79 78.5
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 1.5e-30 136.3 93 60.2
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 2.7e-24 115.5 86 58.1
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 6.1e-24 114.4 109 48.6
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 2.2e-21 105.9 102 46.1
SEGI_19371 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 2.4e-20 102.4 110 46.4
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 1.6e-19 99.8 120 42.5
Pp3c5_10140 Physcomitrium patens HOM05D006669 ORTHO05D008440 4.5e-19 98.2 121 38.8
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 1.7e-18 96.3 120 41.7
Manes.07G077122 Manihot esculenta HOM05D006669 ORTHO05D008440 1.5e-14 83.2 39 84.6
Dinv26898 Davidia involucrata HOM05D006669 ORTHO05D008440 2.0e-11 72.8 52 63.5
Cre09.g389001 Chlamydomonas reinhardtii HOM05D006669 ORTHO05D008440 6.6e-10 67.8 108 35.2
FvH4_1g17190 Fragaria vesca HOM05D006669 ORTHO05D008440 4.0e-07 58.5 26 80.8
Hma1.2p1_1506F.1_g287540 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 1.2e-06 57.0 26 80.8
MCO03G360 Micromonas commoda HOM05D006669 ORTHO05D008440 3.4e-06 55.5 45 53.3
Zm00001eb214300 Zea mays HOM05D006669 ORTHO05D008440 9.8e-06 53.9 26 76.9


User provided reference genes

Program Settings