Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 3.2e-74 281.6 134 100.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 2.3e-64 248.8 134 87.3
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 5.2e-64 247.7 131 89.3
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 5.2e-64 247.7 131 89.3
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 5.2e-64 247.7 134 87.3
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.7e-64 247.3 130 88.5
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 8.8e-64 246.9 130 88.5
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.0e-63 245.7 130 87.7
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 3.3e-63 245.0 130 87.7
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 4.4e-63 244.6 130 87.7
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 5.7e-63 244.2 134 85.8
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.3e-62 243.0 130 86.9
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.3e-62 243.0 130 87.7
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 2.8e-62 241.9 134 84.3
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 4.8e-62 241.1 130 86.9
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 4.8e-62 241.1 134 84.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 6.3e-62 240.7 142 81.7
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 6.3e-62 240.7 131 85.5
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 8.2e-62 240.4 130 86.9
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.1e-61 240.0 130 86.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.4e-61 239.6 131 86.3
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.4e-61 239.6 131 85.5
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.4e-61 239.6 134 83.6
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.4e-61 239.6 130 86.9
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.4e-61 239.6 134 83.6
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.1e-61 238.0 134 82.8
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.1e-61 238.0 132 83.3
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 4.1e-61 238.0 130 85.4
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 7.0e-61 237.3 134 82.8
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 7.0e-61 237.3 130 85.4
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 9.1e-61 236.9 134 83.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.0e-60 235.7 134 82.1
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.6e-60 235.3 131 84.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 2.6e-60 235.3 131 84.0
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.6e-60 235.3 135 83.0
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 3.5e-60 235.0 135 81.5
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 4.5e-60 234.6 131 83.2
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 5.9e-60 234.2 131 84.0
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.7e-60 233.8 131 83.2
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 7.7e-60 233.8 130 84.6
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.3e-59 233.0 131 84.0
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.7e-59 232.6 134 78.4
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.9e-59 231.9 135 80.0
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.9e-59 231.9 131 80.2
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 3.8e-59 231.5 131 83.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 3.8e-59 231.5 135 79.3
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.9e-58 229.2 131 80.2
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.2e-58 228.0 135 80.0
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 7.2e-58 227.3 130 80.8
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.2e-57 226.5 135 79.3
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.2e-57 226.5 135 79.3
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.1e-57 225.7 131 79.4
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.7e-57 225.3 131 81.7
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 8.0e-57 223.8 135 75.6
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 8.0e-57 223.8 135 77.0
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.4e-56 223.0 135 77.8
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.4e-56 223.0 131 77.9
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.8e-56 222.6 131 77.1
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.8e-56 222.6 131 77.1
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.8e-56 222.6 135 75.6
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.3e-56 222.2 131 76.3
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 5.2e-56 221.1 131 78.6
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 6.8e-56 220.7 131 77.1
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 8.8e-56 220.3 135 77.8
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 8.8e-56 220.3 131 77.9
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 2.0e-55 219.2 135 78.5
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 4.4e-55 218.0 131 75.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 4.4e-55 218.0 131 77.1
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 5.7e-55 217.6 131 76.3
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 5.7e-55 217.6 131 76.3
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.7e-54 216.1 116 87.1
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 1.7e-54 216.1 131 76.3
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 6.3e-54 214.2 131 73.3
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.4e-53 212.2 127 75.6
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 4.1e-53 211.5 131 74.8
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 7.0e-53 210.7 125 75.2
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 2.9e-51 205.3 214 52.3
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 3.6e-49 198.4 199 53.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 2.3e-48 195.7 131 68.7
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 5.2e-48 194.5 131 67.9
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.2e-47 193.4 194 53.6
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 5.7e-47 191.0 128 69.5
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 3.7e-46 188.3 131 65.6
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.3e-43 179.9 105 81.0
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.5e-42 176.4 129 61.2
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 4.9e-38 161.4 135 63.0
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 2.7e-36 155.6 135 57.0
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 2.0e-28 129.4 71 83.1
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.5e-26 123.2 132 46.2
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 6.8e-24 114.4 112 46.4
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 9.8e-23 110.5 64 82.8
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.9e-22 109.0 76 61.8
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.1e-21 107.1 60 80.0
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 7.8e-20 100.9 107 46.7
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.3e-19 99.4 96 46.9
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 3.3e-18 95.5 94 50.0
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.9e-13 79.7 43 76.7
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 4.9e-06 55.1 53 56.6


User provided reference genes

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