Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p038990 Quercus lobata HOM05D001756 ORTHO05D001581 4.3e-40 167.5 85 100.0
CiPaw.01G002400 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.6e-13 78.6 87 52.9
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 3.8e-12 74.7 88 56.8
GSVIVG01004437001 Vitis vinifera HOM05D001756 ORTHO05D001581 6.5e-12 73.9 85 51.8
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 1.4e-11 72.8 80 50.0
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 1.9e-11 72.4 85 55.3
MD02G1189200 Malus domestica HOM05D001756 ORTHO05D001581 1.9e-11 72.4 86 51.2
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 1.9e-11 72.4 86 52.3
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 2.5e-11 72.0 85 50.6
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 3.2e-11 71.6 87 51.7
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 3.2e-11 71.6 85 50.6
MD15G1300000 Malus domestica HOM05D001756 ORTHO05D001581 4.2e-11 71.2 85 47.1
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 7.2e-11 70.5 84 53.6
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 9.4e-11 70.1 81 50.6
vmacro18016 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.2e-10 69.7 80 52.5
FAN23G1434 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.1e-10 68.9 86 50.0
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.1e-10 68.9 86 50.0
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 2.1e-10 68.9 79 46.8
Eucgr.I00676 Eucalyptus grandis HOM05D001756 ORTHO05D001581 2.7e-10 68.6 85 45.9
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 4.6e-10 67.8 87 54.0
Hma1.2p1_0424F.1_g150520 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 4.6e-10 67.8 86 50.0
Hund16415 Selenicereus undatus HOM05D001756 ORTHO05D001581 4.6e-10 67.8 83 51.8
CSS0049317 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 6.1e-10 67.4 86 50.0
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.9e-10 67.0 79 50.6
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 7.9e-10 67.0 85 49.4
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 1.0e-09 66.6 89 48.3
CiPaw.02G001200 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.4e-09 66.2 87 51.7
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.4e-09 66.2 87 48.3
Actinidia11965 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.8e-09 65.9 87 47.1
CSS0048277 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.8e-09 65.9 86 48.8
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 2.3e-09 65.5 80 48.8
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 3.0e-09 65.1 85 44.7
Duzib147G1196 Durio zibethinus HOM05D001756 ORTHO05D001581 3.0e-09 65.1 88 48.9
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 3.0e-09 65.1 88 47.7
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 3.0e-09 65.1 88 47.7
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 3.0e-09 65.1 81 50.6
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 3.0e-09 65.1 79 53.2
Ciclev10026870m.g Citrus clementina HOM05D001756 ORTHO05D001581 3.9e-09 64.7 86 50.0
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 3.9e-09 64.7 85 49.4
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 3.9e-09 64.7 87 48.3
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 3.9e-09 64.7 85 45.9
arahy.Tifrunner.gnm1.ann1.F1MTJK Arachis hypogaea HOM05D001756 ORTHO05D001581 5.1e-09 64.3 85 44.7
AUR62007537 Chenopodium quinoa HOM05D001756 ORTHO05D001581 5.1e-09 64.3 85 45.9
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 5.1e-09 64.3 89 50.6
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 5.1e-09 64.3 85 51.8
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 6.7e-09 63.9 78 48.7
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 6.7e-09 63.9 86 45.3
Cc07_g07320 Coffea canephora HOM05D001756 ORTHO05D001581 8.8e-09 63.5 88 47.7
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 8.8e-09 63.5 86 48.8
A09p42920 Brassica napus HOM05D001756 ORTHO05D001581 1.1e-08 63.2 84 47.6
BraA09t39759Z Brassica rapa HOM05D001756 ORTHO05D001581 1.1e-08 63.2 84 47.6
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 1.1e-08 63.2 85 44.7
Solyc02g092110.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 1.1e-08 63.2 88 46.6
PGSC0003DMG400004941 Solanum tuberosum HOM05D001756 ORTHO05D001581 1.1e-08 63.2 75 46.7
vmacro21422 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.1e-08 63.2 81 48.1
AUR62004029 Chenopodium quinoa HOM05D001756 ORTHO05D001581 1.5e-08 62.8 85 45.9
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 1.5e-08 62.8 86 46.5
Manes.13G109600 Manihot esculenta HOM05D001756 ORTHO05D001581 1.5e-08 62.8 80 47.5
PGSC0003DMG400021406 Solanum tuberosum HOM05D001756 ORTHO05D001581 1.5e-08 62.8 88 46.6
Nitab4.5_0000142g0340 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.9e-08 62.4 88 46.6
Prupe.1G420000 Prunus persica HOM05D001756 ORTHO05D001581 1.9e-08 62.4 87 51.7
Rhsim06G0064200 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.9e-08 62.4 78 53.8
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.9e-08 62.4 87 44.8
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 2.5e-08 62.0 84 48.8
CiPaw.07G172800 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.5e-08 62.0 86 47.7
Glyma.14G089063 Glycine max HOM05D001756 ORTHO05D001581 2.5e-08 62.0 85 49.4
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 2.5e-08 62.0 91 48.4
Lj5g0025862 Lotus japonicus HOM05D001756 ORTHO05D001581 2.5e-08 62.0 84 45.2
MD08G1079100 Malus domestica HOM05D001756 ORTHO05D001581 2.5e-08 62.0 85 43.5
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 3.3e-08 61.6 84 48.8
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 3.3e-08 61.6 87 47.1
Rhsim08G0091000 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.3e-08 61.6 85 47.1
TWI74G0998 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.3e-08 61.6 77 50.6
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.3e-08 61.6 82 48.8
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 4.3e-08 61.2 79 46.8
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 4.3e-08 61.2 91 48.4
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.3e-08 61.2 84 47.6
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 4.3e-08 61.2 84 46.4
Sopen02g036700 Solanum pennellii HOM05D001756 ORTHO05D001581 4.3e-08 61.2 88 44.3
Sopen04g031220 Solanum pennellii HOM05D001756 ORTHO05D001581 4.3e-08 61.2 75 45.3
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 5.7e-08 60.8 81 48.1
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 7.4e-08 60.5 79 51.9
QL12p038416 Quercus lobata HOM05D001756 ORTHO05D001581 7.4e-08 60.5 82 52.4
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 7.4e-08 60.5 86 50.0
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 9.7e-08 60.1 86 45.3
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 9.7e-08 60.1 86 45.3
Gohir.D12G076500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.7e-08 60.1 91 47.3
QL11p029356 Quercus lobata HOM05D001756 ORTHO05D001581 9.7e-08 60.1 80 45.0
Solyc04g077580.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 9.7e-08 60.1 75 44.0
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 1.3e-07 59.7 85 43.5
AL5G29770 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 1.3e-07 59.7 85 45.9
CANSAT25G3420 Cannabis sativa HOM05D001756 ORTHO05D001581 1.3e-07 59.7 90 45.6
PGR004G0933 Punica granatum HOM05D001756 ORTHO05D001581 1.3e-07 59.7 82 47.6
AT3G49780 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 1.7e-07 59.3 81 43.2
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 1.7e-07 59.3 80 48.8
ECA238G4790 Erigeron canadensis HOM05D001756 ORTHO05D001581 1.7e-07 59.3 85 44.7
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 1.7e-07 59.3 85 43.5
Lj2g0014409 Lotus japonicus HOM05D001756 ORTHO05D001581 1.7e-07 59.3 78 43.6
Cfa004383 Carpinus fangiana HOM05D001756 ORTHO05D001581 2.2e-07 58.9 78 48.7
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 2.2e-07 58.9 85 44.7
Nitab4.5_0009491g0010 Nicotiana tabacum HOM05D001756 ORTHO05D001581 2.2e-07 58.9 78 43.6
Psat2g172320 Pisum sativum HOM05D001756 ORTHO05D001581 2.2e-07 58.9 85 45.9
Potri.009G085600 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.2e-07 58.9 85 42.4
Thecc.02G119700 Theobroma cacao HOM05D001756 ORTHO05D001581 2.2e-07 58.9 88 43.2
arahy.Tifrunner.gnm1.ann1.22FXNP Arachis hypogaea HOM05D001756 ORTHO05D001581 2.8e-07 58.5 85 42.4
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.8e-07 58.5 85 45.9
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.8e-07 58.5 85 45.9
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 2.8e-07 58.5 85 43.5
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 3.7e-07 58.2 76 47.4
CsaV3_6G044290 Cucumis sativus L. HOM05D001756 ORTHO05D001581 3.7e-07 58.2 85 42.4
Glyma.17G233400 Glycine max HOM05D001756 ORTHO05D001581 3.7e-07 58.2 79 53.2
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 3.7e-07 58.2 89 46.1
Sabra09G0065700 Salix brachista HOM05D001756 ORTHO05D001581 3.7e-07 58.2 88 44.3
Sp7g35370 Schrenkiella parvula HOM05D012092 ORTHO05D001581 3.7e-07 58.2 83 42.2
Hund13962 Selenicereus undatus HOM05D001756 ORTHO05D001581 3.7e-07 58.2 81 44.4
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 3.7e-07 58.2 86 47.7
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 4.8e-07 57.8 79 45.6
CiPaw.08G051600 Carya illinoinensis HOM05D001756 ORTHO05D001581 4.8e-07 57.8 85 45.9
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 4.8e-07 57.8 79 45.6
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 4.8e-07 57.8 87 42.5
MD15G1066300 Malus domestica HOM05D001756 ORTHO05D001581 4.8e-07 57.8 91 45.1
Rhsim06G0064100 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.8e-07 57.8 81 46.9
Gohir.D03G030200 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.3e-07 57.4 87 44.8
Peaxi162Scf00548g00113 Petunia axillaris HOM05D001756 ORTHO05D001581 6.3e-07 57.4 85 44.7
ClCG01G017770 Citrullus lanatus HOM05D001756 ORTHO05D001581 8.2e-07 57.0 89 41.6
Phvul.003G233400 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 8.2e-07 57.0 85 43.5
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.1e-06 56.6 87 44.8
Duzib132G0635 Durio zibethinus HOM05D001756 ORTHO05D001581 1.1e-06 56.6 84 38.1
FAN27G1437 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.1e-06 56.6 86 44.2
Lsat_1_v5_gn_3_86460 Lactuca sativa HOM05D001756 ORTHO05D001581 1.1e-06 56.6 85 42.4
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 1.1e-06 56.6 86 40.7
Sed0002457 Sechium edule HOM05D001756 ORTHO05D001581 1.1e-06 56.6 88 44.3
Actinidia04395 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.4e-06 56.2 79 45.6
Thhalv10010875m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 1.4e-06 56.2 84 45.2
PSO017G5266 Papaver somniferum HOM05D001756 ORTHO05D001581 1.4e-06 56.2 84 41.7
CARHR114180 Cardamine hirsuta HOM05D001756 ORTHO05D001581 1.8e-06 55.8 89 42.7
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 1.8e-06 55.8 89 48.3
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 1.8e-06 55.8 79 45.6
Gohir.A02G150100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.8e-06 55.8 87 44.8
Gorai.003G031900 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.8e-06 55.8 87 43.7
GSVIVG01009309001 Vitis vinifera HOM05D001756 ORTHO05D001581 1.8e-06 55.8 74 48.6
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.4e-06 55.5 81 45.7
CAN.G1343.2 Capsicum annuum HOM05D001756 ORTHO05D001581 2.4e-06 55.5 86 44.2
FAN15G0430 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.4e-06 55.5 86 43.0
Manes.07G057300 Manihot esculenta HOM05D001756 ORTHO05D001581 2.4e-06 55.5 83 43.4
Peaxi162Scf00340g00412 Petunia axillaris HOM05D001756 ORTHO05D001581 2.4e-06 55.5 77 48.1
PGSC0003DMG400021407 Solanum tuberosum HOM05D001756 ORTHO05D001581 2.4e-06 55.5 93 43.0
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 2.4e-06 55.5 79 45.6
Actinidia00357 Actinidia chinensis HOM05D001756 ORTHO05D001581 3.1e-06 55.1 81 48.1
AT2G22860 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 3.1e-06 55.1 88 43.2
BcaB05g23153 Brassica carinata HOM05D001756 ORTHO05D001581 3.1e-06 55.1 74 45.9
BcaC07g39442 Brassica carinata HOM05D001756 ORTHO05D001581 3.1e-06 55.1 74 47.3
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 3.1e-06 55.1 84 45.2
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 3.1e-06 55.1 84 45.2
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 3.1e-06 55.1 84 45.2
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 3.1e-06 55.1 84 45.2
CARHR114170 Cardamine hirsuta HOM05D001756 ORTHO05D001581 3.1e-06 55.1 89 42.7
FAN20G1648 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.1e-06 55.1 79 39.2
Sabra16G0181600 Salix brachista HOM05D001756 ORTHO05D001581 3.1e-06 55.1 79 38.0
Solyc02g092120.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 3.1e-06 55.1 86 43.0
THA.LOC104819883 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 3.1e-06 55.1 87 42.5
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.1e-06 54.7 86 44.2
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 4.1e-06 54.7 77 42.9
Lalb_Chr06g0164991 Lupinus albus HOM05D001756 ORTHO05D001581 4.1e-06 54.7 67 43.3
Sopen02g036710 Solanum pennellii HOM05D001756 ORTHO05D001581 4.1e-06 54.7 86 43.0
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 4.1e-06 54.7 82 43.9
AT4G37720 Arabidopsis thaliana HOM05D012092 ORTHO05D001581 5.3e-06 54.3 82 41.5
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.3e-06 54.3 86 43.0
Duzib187G0009 Durio zibethinus HOM05D001756 ORTHO05D001581 5.3e-06 54.3 86 44.2
Glyma.17G233500 Glycine max HOM05D001756 ORTHO05D001581 5.3e-06 54.3 85 47.1
Peaxi162Scf00548g00114 Petunia axillaris HOM05D001756 ORTHO05D001581 5.3e-06 54.3 88 43.2
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 5.3e-06 54.3 86 43.0
Cfa013750 Carpinus fangiana HOM05D001756 ORTHO05D001581 6.9e-06 53.9 91 41.8
Lj5g0015089 Lotus japonicus HOM05D001756 ORTHO05D001581 6.9e-06 53.9 81 50.6
Peaxi162Scf00340g00059 Petunia axillaris HOM05D001756 ORTHO05D001581 6.9e-06 53.9 77 44.2
BcaB01g00674 Brassica carinata HOM05D001756 ORTHO05D001581 9.1e-06 53.5 74 45.9
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 9.1e-06 53.5 86 39.5
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.1e-06 53.5 79 44.3
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 9.1e-06 53.5 79 44.3
HanXRQChr09g0255351 Helianthus annuus HOM05D001756 ORTHO05D001581 9.1e-06 53.5 75 45.3
Medtr5g015140 Medicago truncatula HOM05D001756 ORTHO05D001581 9.1e-06 53.5 80 41.2
Hund06508 Selenicereus undatus HOM05D001756 ORTHO05D001581 9.1e-06 53.5 78 39.7


User provided reference genes

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