Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 1.7e-54 215.7 102 100.0
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 2.1e-49 198.7 102 91.2
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.8e-48 195.7 102 88.2
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.8e-48 195.7 102 88.2
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 3.9e-48 194.5 102 87.3
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 8.8e-48 193.4 102 86.3
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 2.6e-47 191.8 102 86.3
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 2.6e-47 191.8 102 85.3
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 3.3e-47 191.4 102 85.3
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 3.3e-47 191.4 102 85.3
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 9.7e-47 189.9 102 84.3
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 1.3e-46 189.5 102 84.3
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.7e-46 189.1 102 84.3
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.7e-46 189.1 102 84.3
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 1.7e-46 189.1 102 85.3
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 2.2e-46 188.7 102 86.3
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 2.2e-46 188.7 102 84.3
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 2.8e-46 188.3 102 85.3
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.8e-46 187.6 102 85.3
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 4.8e-46 187.6 101 83.2
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 6.3e-46 187.2 102 83.3
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 8.2e-46 186.8 102 82.4
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 1.1e-45 186.4 102 85.3
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-45 186.4 102 85.3
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 1.1e-45 186.4 98 85.7
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 1.1e-45 186.4 102 85.3
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.4e-45 186.0 102 82.4
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 3.1e-45 184.9 102 82.4
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 3.1e-45 184.9 102 84.3
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 3.1e-45 184.9 102 84.3
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 4.1e-45 184.5 102 84.3
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 4.1e-45 184.5 102 81.4
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 5.3e-45 184.1 102 83.3
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 7.0e-45 183.7 102 84.3
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 9.1e-45 183.3 102 79.4
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 9.1e-45 183.3 104 80.8
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 9.1e-45 183.3 102 83.3
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 9.1e-45 183.3 100 83.0
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 9.1e-45 183.3 101 82.2
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 1.2e-44 183.0 102 81.4
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.2e-44 183.0 102 81.4
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.2e-44 183.0 102 81.4
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 2.0e-44 182.2 102 79.4
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 2.0e-44 182.2 102 83.3
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.0e-44 182.2 100 82.0
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 2.0e-44 182.2 101 83.2
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 2.6e-44 181.8 102 80.4
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 3.5e-44 181.4 102 80.4
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 3.5e-44 181.4 102 78.4
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 4.5e-44 181.0 102 78.4
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 4.5e-44 181.0 102 80.4
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.9e-44 180.6 102 82.4
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 5.9e-44 180.6 98 82.7
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 7.7e-44 180.3 101 79.2
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 7.7e-44 180.3 101 79.2
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 7.7e-44 180.3 102 78.4
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 1.0e-43 179.9 102 78.4
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 1.3e-43 179.5 102 79.4
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 1.7e-43 179.1 102 80.4
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 1.7e-43 179.1 102 80.4
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 1.7e-43 179.1 102 80.4
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 2.2e-43 178.7 100 83.0
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 6.5e-43 177.2 102 78.4
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 8.5e-43 176.8 102 82.4
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 8.5e-43 176.8 101 78.2
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.1e-42 176.4 101 80.2
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 1.1e-42 176.4 102 81.4
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 1.5e-42 176.0 102 78.4
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.5e-42 176.0 101 78.2
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 2.5e-42 175.3 100 80.0
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 4.2e-42 174.5 102 78.4
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 7.2e-42 173.7 104 76.9
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 7.2e-42 173.7 102 74.5
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 7.2e-42 173.7 102 76.5
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 9.4e-42 173.3 102 75.5
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 9.4e-42 173.3 104 78.8
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 1.2e-41 172.9 102 75.5
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 1.6e-41 172.6 103 78.6
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 1.6e-41 172.6 99 80.8
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 1.6e-41 172.6 101 75.2
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 2.1e-41 172.2 102 74.5
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 2.7e-41 171.8 103 77.7
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 8.0e-41 170.2 102 74.5
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.0e-40 169.9 102 74.5
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.4e-40 169.5 102 77.5
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 2.3e-40 168.7 99 77.8
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 3.0e-40 168.3 99 78.8
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 3.0e-40 168.3 102 75.5
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 6.7e-40 167.2 102 72.5
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 6.7e-40 167.2 102 76.5
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 8.8e-40 166.8 99 80.8
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.2e-39 166.4 102 74.5
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 2.0e-39 165.6 102 71.6
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 2.0e-39 165.6 97 75.3
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.6e-39 165.2 94 83.0
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 3.3e-39 164.9 101 73.3
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 4.4e-39 164.5 98 73.5
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 5.7e-39 164.1 96 76.0
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 7.5e-39 163.7 98 72.4
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 7.5e-39 163.7 98 72.4
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 7.5e-39 163.7 98 73.5
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 7.5e-39 163.7 98 73.5
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 9.7e-39 163.3 98 72.4
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 9.7e-39 163.3 102 71.6
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.7e-38 162.5 102 72.5
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 1.7e-38 162.5 98 72.4
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 1.7e-38 162.5 101 73.3
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 1.7e-38 162.5 99 77.8
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.3e-37 157.5 95 78.9
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 1.6e-36 156.0 102 73.5
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 5.9e-36 154.1 101 72.3
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 7.7e-36 153.7 102 67.6
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 1.7e-35 152.5 102 70.6
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 2.7e-33 145.2 101 64.4
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 3.6e-33 144.8 90 74.4
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 4.7e-33 144.4 100 62.0
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.0e-33 143.7 102 71.6
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 2.3e-32 142.1 102 70.6
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 2.3e-32 142.1 101 66.3
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 6.8e-32 140.6 102 67.6
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 1.2e-31 139.8 95 69.5
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.6e-31 138.7 101 70.3
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 6.3e-30 134.0 97 59.8
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 2.5e-26 122.1 101 51.5
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 3.6e-25 118.2 72 80.6
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 8.9e-24 113.6 63 82.5
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.5e-23 110.5 102 55.9
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.8e-22 108.6 94 59.6
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 9.5e-18 93.6 95 46.3
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 9.5e-18 93.6 63 74.6
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 3.7e-14 81.6 98 48.0
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 1.1e-10 70.1 46 69.6
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 1.6e-09 66.2 115 33.9
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 5.2e-08 61.2 94 44.7


User provided reference genes

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