Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 1.6e-71 272.7 143 100.0
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.3e-25 120.2 146 54.8
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.9e-24 116.3 146 55.5
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 7.5e-21 104.4 160 46.9
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 5.4e-19 98.2 138 44.2
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 6.6e-17 91.3 142 43.0
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 3.3e-16 89.0 141 47.5
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 9.5e-16 87.4 38 89.5
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.2e-15 87.0 154 42.2
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.6e-15 86.7 77 54.5
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.6e-15 85.5 129 44.2
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.6e-15 85.5 77 54.5
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 8.1e-15 84.3 101 47.5
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.4e-14 83.6 152 44.7
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.8e-14 83.2 138 47.1
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 2.3e-14 82.8 113 43.4
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 2.3e-14 82.8 140 47.9
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.1e-14 82.4 129 43.4
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 4.0e-14 82.0 145 37.9
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 6.8e-14 81.3 143 40.6
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 6.8e-14 81.3 116 50.9
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 8.9e-14 80.9 99 43.4
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 8.9e-14 80.9 37 89.2
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.5e-13 80.1 40 80.0
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.5e-13 80.1 35 91.4
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.6e-13 79.3 36 83.3
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 2.6e-13 79.3 112 53.6
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.6e-13 79.3 43 81.4
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 3.4e-13 79.0 36 88.9
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 3.4e-13 79.0 36 88.9
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 3.4e-13 79.0 36 88.9
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 3.4e-13 79.0 36 86.1
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 3.4e-13 79.0 34 91.2
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 4.4e-13 78.6 141 37.6
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 4.4e-13 78.6 37 86.5
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 5.8e-13 78.2 40 80.0
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 7.5e-13 77.8 111 52.3
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 9.9e-13 77.4 40 82.5
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.3e-12 77.0 71 52.1
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.3e-12 77.0 40 80.0
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 1.3e-12 77.0 136 44.9
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.7e-12 76.6 40 82.5
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.7e-12 76.6 137 40.1
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.7e-12 76.6 124 37.9
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.2e-12 76.3 52 61.5
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 2.9e-12 75.9 100 49.0
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 2.9e-12 75.9 36 80.6
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.9e-12 75.9 154 33.1
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.9e-12 75.9 87 43.7
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.7e-12 75.5 136 39.0
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.7e-12 75.5 62 59.7
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 3.7e-12 75.5 118 53.4
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 3.7e-12 75.5 78 51.3
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 4.9e-12 75.1 40 80.0
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 6.4e-12 74.7 36 83.3
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 8.3e-12 74.3 117 36.8
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 8.3e-12 74.3 105 39.0
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 8.3e-12 74.3 121 36.4
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.1e-11 73.9 106 41.5
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.1e-11 73.9 119 39.5
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-11 73.9 117 44.4
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 1.1e-11 73.9 40 77.5
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.1e-11 73.9 95 45.3
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.4e-11 73.6 36 77.8
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-11 73.2 79 45.6
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.9e-11 73.2 79 45.6
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.9e-11 73.2 36 83.3
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.4e-11 72.8 68 54.4
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 3.2e-11 72.4 137 34.3
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 5.4e-11 71.6 32 87.5
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 7.1e-11 71.2 119 38.7
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 7.1e-11 71.2 70 50.0
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 9.2e-11 70.9 105 39.0
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 9.2e-11 70.9 37 75.7
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.2e-10 70.5 42 73.8
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.6e-10 70.1 81 44.4
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.6e-10 70.1 81 44.4
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.6e-10 70.1 81 44.4
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 2.7e-10 69.3 29 89.7
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 2.7e-10 69.3 105 49.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 2.7e-10 69.3 105 49.5
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 2.7e-10 69.3 40 72.5
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.7e-10 69.3 40 70.0
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 2.7e-10 69.3 149 38.3
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 4.6e-10 68.6 37 73.0
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.0e-09 67.4 32 75.0
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.0e-09 67.4 40 70.0
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.3e-09 67.0 109 36.7
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.3e-09 67.0 100 37.0
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.3e-09 67.0 37 70.3
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.7e-09 66.6 78 53.8
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 2.3e-09 66.2 55 52.7
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 3.0e-09 65.9 58 56.9
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.0e-09 65.9 33 75.8
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 3.9e-09 65.5 107 36.4
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 5.1e-09 65.1 30 80.0
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.6e-09 64.3 106 36.8
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.3e-08 61.2 30 76.7
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.3e-08 61.2 30 76.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.3e-08 61.2 30 76.7
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.2e-07 60.5 81 43.2
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.1e-07 59.7 31 67.7
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 4.0e-06 55.5 28 71.4
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 5.2e-06 55.1 95 34.7


User provided reference genes

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