Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 3.2e-66 255.0 131 100.0
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 3.0e-64 248.4 131 97.7
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 6.4e-27 124.4 115 62.6
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 3.2e-26 122.1 124 59.7
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 5.5e-26 121.3 110 69.1
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 7.1e-26 120.9 106 64.2
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 1.0e-24 117.1 111 61.3
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 1.3e-24 116.7 130 56.9
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 4.3e-23 111.7 107 61.7
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 8.1e-22 107.5 115 58.3
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 1.1e-21 107.1 113 58.4
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 9.0e-21 104.0 109 56.9
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.6e-20 102.4 118 54.2
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 2.6e-20 102.4 115 56.5
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 7.6e-20 100.9 115 55.7
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.3e-19 100.1 107 57.9
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.3e-19 100.1 112 47.3
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 3.8e-19 98.6 113 53.1
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 4.9e-19 98.2 84 65.5
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 1.4e-18 96.7 96 60.4
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.9e-18 96.3 117 53.8
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 4.2e-18 95.1 88 63.6
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 4.2e-18 95.1 103 58.3
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 5.5e-18 94.7 123 51.2
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 1.6e-17 93.2 100 53.0
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 2.7e-17 92.4 100 57.0
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 2.7e-17 92.4 100 53.0
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 3.5e-17 92.0 84 60.7
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 3.5e-17 92.0 112 50.0
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 6.0e-17 91.3 100 52.0
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 1.3e-16 90.1 98 58.2
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.3e-16 90.1 92 52.2
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 1.9e-15 86.3 84 58.3
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 2.5e-15 85.9 102 52.0
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 2.5e-15 85.9 78 61.5
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 4.3e-15 85.1 113 51.3
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 5.7e-15 84.7 97 49.5
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 7.4e-15 84.3 96 50.0
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 1.6e-14 83.2 97 44.3
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 2.1e-14 82.8 102 46.1
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 2.1e-14 82.8 100 55.0
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 1.8e-13 79.7 128 46.1
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 3.1e-13 79.0 83 57.8
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 4.1e-13 78.6 82 56.1
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 2.6e-12 75.9 105 49.5
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 4.5e-12 75.1 95 52.6
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 4.5e-12 75.1 100 44.0
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 4.5e-12 75.1 78 62.8
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 5.9e-12 74.7 110 42.7
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 1.0e-11 73.9 89 53.9
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 1.0e-11 73.9 92 45.7
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.7e-11 73.2 85 55.3
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.7e-11 73.2 85 55.3
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 1.7e-11 73.2 93 46.2
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 3.8e-11 72.0 122 39.3
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 5.0e-11 71.6 128 43.0
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 8.4e-11 70.9 90 44.4
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 8.4e-11 70.9 105 46.7
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 8.4e-11 70.9 104 49.0
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 8.4e-11 70.9 92 46.7
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.1e-10 70.5 101 44.6
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 1.1e-10 70.5 114 39.5
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 1.1e-10 70.5 95 41.1
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 2.5e-10 69.3 109 45.0
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 1.6e-09 66.6 76 56.6
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 6.1e-09 64.7 88 42.0
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 6.7e-08 61.2 83 49.4
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 1.1e-07 60.5 80 45.0
Ah.03g148720 Amaranthus hybridus HOM05D008224 ORTHO05D010083 9.7e-07 57.4 119 34.5
Gohir.A02G170400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.3e-06 57.0 75 48.0
Sed0001082 Sechium edule HOM05D008224 ORTHO05D010083 1.3e-06 57.0 101 41.6
BolSC21t60232H Brassica oleracea HOM05D014245 ORTHO05D010083 2.2e-06 56.2 101 34.7
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 2.2e-06 56.2 105 42.9
Gohir.D03G009600 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.8e-06 55.8 71 49.3
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 8.2e-06 54.3 88 40.9


User provided reference genes

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