Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 5.1e-111 404.4 206 100.0
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 4.5e-75 285.0 208 73.6
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 4.5e-75 285.0 206 74.3
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 4.6e-72 275.0 208 72.1
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 6.1e-72 274.6 206 71.4
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 3.0e-71 272.3 206 70.9
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 4.3e-70 268.5 206 73.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 5.7e-70 268.1 206 69.9
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 7.4e-70 267.7 204 71.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 5.3e-68 261.5 207 70.5
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 6.9e-68 261.2 201 70.1
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 3.4e-67 258.8 206 72.3
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 4.5e-67 258.5 206 69.9
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.9e-67 258.1 206 68.4
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.0e-66 257.3 207 68.1
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 1.3e-66 256.9 206 69.4
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 8.5e-66 254.2 206 68.9
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.4e-65 253.4 206 68.9
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 2.5e-65 252.7 206 68.0
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 4.2e-65 251.9 208 69.7
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 4.2e-65 251.9 208 69.7
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.2e-64 250.4 204 67.2
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 3.6e-64 248.8 209 67.0
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 4.6e-64 248.4 207 68.1
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 4.6e-64 248.4 207 68.1
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 6.1e-64 248.1 207 69.6
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.9e-64 247.7 207 69.1
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 6.7e-63 244.6 204 68.1
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 2.0e-62 243.0 212 64.2
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 4.4e-62 241.9 207 68.1
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 5.7e-62 241.5 207 68.1
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 9.7e-62 240.7 204 66.2
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.2e-61 239.6 207 65.7
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.8e-61 239.2 208 64.4
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.8e-61 239.2 205 68.3
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 6.3e-61 238.0 206 65.5
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.8e-60 236.5 207 66.7
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 3.1e-60 235.7 207 62.3
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 3.1e-60 235.7 213 62.9
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 9.1e-60 234.2 217 60.4
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 9.1e-60 234.2 207 66.7
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 3.4e-59 232.3 207 61.4
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.0e-58 230.7 208 65.4
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.7e-58 229.9 198 62.1
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.7e-58 229.9 209 63.6
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 2.2e-58 229.6 199 66.8
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 3.8e-58 228.8 197 65.0
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 6.5e-58 228.0 177 70.6
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 6.5e-58 228.0 205 63.4
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 8.5e-58 227.6 205 63.9
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.1e-57 227.3 208 63.9
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.4e-57 226.9 206 63.1
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 3.2e-57 225.7 208 63.0
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.2e-56 223.8 209 62.2
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.2e-56 223.8 209 64.1
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 6.1e-56 221.5 209 62.2
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 7.9e-56 221.1 205 61.5
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.8e-55 219.9 205 61.0
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 3.0e-55 219.2 206 62.6
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 5.2e-55 218.4 211 58.8
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 6.7e-55 218.0 210 58.1
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 8.8e-55 217.6 209 57.9
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 8.8e-55 217.6 209 57.9
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 8.8e-55 217.6 209 57.9
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 8.8e-55 217.6 209 57.9
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 2.6e-54 216.1 209 57.4
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.6e-54 216.1 211 57.3
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 3.3e-54 215.7 202 61.4
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 7.4e-54 214.5 147 78.2
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 7.4e-54 214.5 208 59.1
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 7.4e-54 214.5 219 58.0
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 2.8e-53 212.6 206 58.7
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 4.8e-53 211.8 207 60.9
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.2e-53 211.1 210 58.1
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 8.2e-53 211.1 213 58.7
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 1.8e-52 209.9 209 55.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 4.1e-52 208.8 212 55.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 4.1e-52 208.8 209 55.5
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 4.1e-52 208.8 197 60.4
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 5.3e-52 208.4 195 60.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 9.1e-52 207.6 169 66.3
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.2e-51 207.2 207 58.9
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.6e-51 206.8 187 60.4
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 2.9e-50 202.6 206 56.8
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.5e-49 200.3 199 55.3
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.6e-48 196.8 214 54.2
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 8.0e-48 194.5 199 54.3
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 8.0e-48 194.5 199 57.3
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 4.0e-47 192.2 217 53.5
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 6.7e-47 191.4 194 54.6
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 2.0e-46 189.9 184 59.2
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.3e-45 187.2 187 57.2
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.4e-44 183.7 213 50.7
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 2.4e-44 183.0 171 57.9
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 4.1e-44 182.2 152 63.8
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 4.1e-44 182.2 216 50.0
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 5.0e-42 175.3 207 50.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.5e-41 172.9 211 49.8
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.2e-40 170.6 162 54.3
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 2.1e-40 169.9 213 46.5
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 4.0e-39 165.6 160 54.4
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 6.3e-37 158.3 158 51.3
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 7.0e-28 128.3 92 65.2
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.3e-26 123.2 141 53.2
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 6.8e-23 111.7 110 56.4
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 3.5e-19 99.4 171 32.7
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.3e-18 97.4 121 52.1
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 6.6e-18 95.1 160 33.8
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 4.0e-15 85.9 119 47.1
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 8.9e-15 84.7 144 29.9
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.0e-14 83.6 152 28.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 2.0e-14 83.6 144 39.6
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 6.4e-13 78.6 148 34.5
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.0e-11 73.6 144 30.6
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.0e-11 73.6 144 32.6
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 2.5e-09 66.6 105 40.0


User provided reference genes

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