Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 7.4e-33 143.3 72 100.0
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 3.0e-18 94.7 73 69.9
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 3.0e-18 94.7 73 69.9
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 1.0e-13 79.7 76 64.5
CiPaw.03G131600 Carya illinoinensis HOM05D008370 ORTHO05D009732 6.5e-13 77.0 74 60.8
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 9.4e-12 73.2 72 52.8
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 9.4e-12 73.2 78 50.0
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 9.4e-12 73.2 71 56.3
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 6.1e-11 70.5 70 57.1
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 1.0e-10 69.7 72 52.8
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 1.4e-10 69.3 70 55.7
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 5.1e-10 67.4 79 50.6
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 2.0e-09 65.5 72 47.2
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 4.3e-09 64.3 70 50.0
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 4.3e-09 64.3 79 49.4
Phvul.009G138200 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 5.7e-09 63.9 72 50.0
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 1.3e-08 62.8 70 52.9
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 2.8e-08 61.6 70 45.7
Phvul.002G267404 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 4.8e-08 60.8 71 50.7
Prupe.6G166400 Prunus persica HOM05D008370 ORTHO05D009732 4.8e-08 60.8 77 51.9
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 8.2e-08 60.1 70 45.7
TPR.G2215 Trifolium pratense HOM05D010746 ORTHO05D009732 1.8e-07 58.9 73 45.2
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 2.4e-07 58.5 72 43.1
Duzib147G0345 Durio zibethinus HOM05D008370 ORTHO05D009732 9.1e-07 56.6 75 46.7
Gorai.003G048600 Gossypium raimondii HOM05D008370 ORTHO05D009732 9.1e-07 56.6 72 45.8
MD15G1335300 Malus domestica HOM05D015647 ORTHO05D009732 9.1e-07 56.6 84 39.3
Ciclev10026869m.g Citrus clementina HOM05D008370 ORTHO05D009732 1.2e-06 56.2 75 45.3
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 1.2e-06 56.2 72 45.8
Gohir.D03G047500 Gossypium hirsutum HOM05D008370 ORTHO05D009732 1.5e-06 55.8 73 47.9
Manes.12G145500 Manihot esculenta HOM05D008370 ORTHO05D009732 2.0e-06 55.5 75 45.3
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 2.0e-06 55.5 72 47.2
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 2.6e-06 55.1 74 40.5
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 3.4e-06 54.7 72 45.8
Gorai.002G039200 Gossypium raimondii HOM05D008370 ORTHO05D009732 3.4e-06 54.7 72 44.4
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 3.4e-06 54.7 77 40.3
Lalb_Chr12g0203411 Lupinus albus HOM05D008370 ORTHO05D009732 3.4e-06 54.7 75 45.3
QL06p031372 Quercus lobata HOM05D008370 ORTHO05D009732 3.4e-06 54.7 69 42.0
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 4.5e-06 54.3 76 40.8
arahy.Tifrunner.gnm1.ann1.U48W6H Arachis hypogaea HOM05D008370 ORTHO05D009732 5.9e-06 53.9 74 41.9
Psat7g050080 Pisum sativum HOM05D008370 ORTHO05D009732 7.7e-06 53.5 72 45.8


User provided reference genes

Program Settings