Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p031201 Quercus lobata HOM05D009414 ORTHO05D010503 1.9e-54 215.7 119 100.0
QL06p036391 Quercus lobata HOM05D009414 ORTHO05D010503 1.7e-42 176.0 119 82.4
Haze_25097 Corylus avellana HOM05D009414 ORTHO05D010503 7.2e-25 117.5 123 61.8
Haze_25098 Corylus avellana HOM05D009414 ORTHO05D010503 7.2e-25 117.5 123 61.8
Cfa002796 Carpinus fangiana HOM05D009414 ORTHO05D010503 3.0e-23 112.1 117 59.0
Cfa002797 Carpinus fangiana HOM05D009414 ORTHO05D010503 3.0e-23 112.1 119 64.7
Haze_25096 Corylus avellana HOM05D009414 ORTHO05D010503 6.7e-23 110.9 115 57.4
Haze_25094 Corylus avellana HOM05D009414 ORTHO05D010503 2.5e-22 109.0 115 56.5
CiPaw.03G130700 Carya illinoinensis HOM05D009414 ORTHO05D010503 1.5e-14 83.2 62 74.2
CiPaw.04G087800 Carya illinoinensis HOM05D009414 ORTHO05D010503 4.3e-14 81.6 103 59.2
Manes.12G146500 Manihot esculenta HOM05D009414 ORTHO05D010503 2.2e-13 79.3 114 51.8
TAR381G0777 Trochodendron aralioides HOM05D009414 ORTHO05D010503 1.1e-12 77.0 103 52.4
TAR381G0868 Trochodendron aralioides HOM05D009414 ORTHO05D010503 1.1e-12 77.0 103 52.4
TAR628G0878 Trochodendron aralioides HOM05D009414 ORTHO05D010503 1.1e-12 77.0 96 49.0
Potri.007G076600 Populus trichocarpa HOM05D009414 ORTHO05D010503 3.1e-12 75.5 112 50.0
QL06p031208 Quercus lobata HOM05D009414 ORTHO05D010503 5.3e-12 74.7 104 51.0
Sabra07G0064500 Salix brachista HOM05D009414 ORTHO05D010503 2.0e-11 72.8 125 46.4
Atru.chr4.624 Acer truncatum HOM05D009414 ORTHO05D010503 2.9e-10 68.9 103 55.3
Prupe.6G161200 Prunus persica HOM05D009414 ORTHO05D010503 3.8e-10 68.6 98 51.0
FAN28G2363 Fragaria x ananassa HOM05D025105 ORTHO05D010503 2.1e-08 62.8 117 41.9
FAN19G1081 Fragaria x ananassa HOM05D025105 ORTHO05D010503 4.7e-08 61.6 119 41.2
FAN23G0066 Fragaria x ananassa HOM05D025105 ORTHO05D010503 4.7e-08 61.6 117 41.0
FvH4_1g23900 Fragaria vesca HOM05D025105 ORTHO05D010503 1.0e-07 60.5 116 41.4
Psat7g049440 Pisum sativum HOM05D015285 ORTHO05D010503 1.8e-07 59.7 94 42.6
Ciclev10027329m.g Citrus clementina HOM05D009414 ORTHO05D010503 3.0e-07 58.9 90 42.2
Manes.13G081600 Manihot esculenta HOM05D009414 ORTHO05D010503 3.9e-07 58.5 94 48.9
Cpa.g.sc1356.2 Carica papaya HOM05D050654 ORTHO05D010503 5.1e-07 58.2 87 44.8
Sed0000016 Sechium edule HOM05D024000 ORTHO05D010503 5.1e-07 58.2 100 44.0
CiPaw.04G087900 Carya illinoinensis HOM05D009414 ORTHO05D010503 6.7e-07 57.8 104 43.3
Nn5g28782 Nelumbo nucifera HOM05D009414 ORTHO05D010503 1.1e-06 57.0 103 44.7
TPR.G2236 Trifolium pratense HOM05D015285 ORTHO05D010503 1.1e-06 57.0 87 48.3
VMungo0251G1892 Vigna mungo HOM05D015285 ORTHO05D010503 1.1e-06 57.0 104 41.3
Glyma.08G145500 Glycine max HOM05D015285 ORTHO05D010503 1.5e-06 56.6 87 46.0
Phvul.002G268100 Phaseolus vulgaris HOM05D015285 ORTHO05D010503 2.0e-06 56.2 86 41.9
Phvul.009G146700 Phaseolus vulgaris HOM05D020870 ORTHO05D022759 2.6e-06 55.8 98 45.9
Nn5g28783 Nelumbo nucifera HOM05D009414 ORTHO05D010503 3.3e-06 55.5 109 37.6
Gohir.D03G048000 Gossypium hirsutum HOM05D018858 ORTHO05D010503 5.7e-06 54.7 50 64.0
Nn1g06054 Nelumbo nucifera HOM05D009414 ORTHO05D010503 7.4e-06 54.3 96 37.5
Nn5g28786 Nelumbo nucifera HOM05D009414 ORTHO05D010503 9.7e-06 53.9 66 40.9
Potri.005G087400 Populus trichocarpa HOM05D009414 ORTHO05D010503 9.7e-06 53.9 88 51.1


User provided reference genes

Program Settings