Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.3e-132 476.5 254 100.0
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.0e-81 305.4 237 71.7
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 5.9e-77 291.6 240 67.9
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.5e-75 286.2 242 64.5
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 2.1e-74 283.1 233 67.0
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.7e-74 282.7 233 66.1
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 8.8e-73 277.7 233 65.7
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 2.0e-72 276.6 233 66.1
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 2.8e-71 272.7 226 64.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 6.3e-71 271.6 224 66.5
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 8.3e-71 271.2 238 65.1
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.1e-70 270.8 221 64.7
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.6e-69 266.9 239 63.6
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 3.5e-69 265.8 233 64.4
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 5.9e-69 265.0 247 62.3
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 3.8e-68 262.3 245 62.0
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 4.2e-67 258.8 229 61.1
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 5.5e-67 258.5 228 61.0
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 1.2e-66 257.3 228 60.5
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 3.6e-66 255.8 227 59.9
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 2.3e-65 253.1 227 59.9
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 8.8e-65 251.1 226 58.8
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.2e-64 250.8 267 55.4
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 3.4e-64 249.2 229 58.1
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 4.4e-64 248.8 233 58.8
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 7.5e-64 248.1 226 60.6
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 6.3e-63 245.0 223 62.8
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.4e-62 241.9 233 60.9
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 6.1e-58 228.4 214 57.9
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.4e-57 227.3 221 59.7
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.5e-56 223.8 226 57.1
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 3.4e-56 222.6 184 63.0
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 3.4e-56 222.6 215 56.7
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 4.4e-56 222.2 221 58.8
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 4.4e-56 222.2 184 63.0
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 1.3e-55 220.7 237 50.6
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.3e-55 220.7 231 55.4
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.1e-54 217.6 232 55.2
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.4e-54 217.2 221 56.6
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.8e-54 216.9 225 53.8
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.7e-53 213.0 220 52.7
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 3.5e-53 212.6 220 52.7
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.5e-53 212.6 221 55.7
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.3e-52 209.9 220 53.2
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.3e-52 209.9 220 53.2
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.3e-52 209.9 215 54.4
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 1.9e-51 206.8 221 50.2
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 3.3e-51 206.1 231 52.4
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.6e-50 203.8 219 51.1
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 2.1e-50 203.4 214 54.7
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 2.8e-50 203.0 220 50.5
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 6.2e-50 201.8 219 50.2
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 6.2e-50 201.8 195 59.0
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 4.0e-49 199.1 143 74.1
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 7.5e-48 194.9 226 49.6
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.2e-47 193.4 224 49.1
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.7e-45 186.4 162 62.3
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 2.8e-42 176.4 173 53.2
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 4.4e-40 169.1 164 56.7
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 1.9e-38 163.7 172 52.3
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.3e-35 152.5 196 40.8
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 1.6e-34 150.6 167 55.1
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 7.6e-32 141.7 116 63.8
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 2.7e-29 133.3 226 35.4
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.5e-27 127.5 210 34.8
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.1e-25 121.3 129 54.3
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 5.2e-25 119.0 106 58.5
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 1.3e-23 114.4 102 59.8
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 8.4e-23 111.7 188 34.0
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.3e-20 103.6 185 35.1
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 3.9e-20 102.8 211 32.7
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 8.7e-20 101.7 211 32.2
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 9.6e-19 98.2 220 33.2
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.3e-15 87.8 111 42.3
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.7e-15 87.4 119 37.8
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 6.4e-15 85.5 68 67.6
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.4e-14 84.3 144 32.6
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 4.2e-14 82.8 64 70.3
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.9e-07 60.1 52 65.4


User provided reference genes

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