Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p027005 Quercus lobata HOM05D007138 ORTHO05D009148 0.0e+00 1609.7 804 100.0
Haze_11677 Corylus avellana HOM05D007138 ORTHO05D009148 5.8e-227 791.6 741 61.5
Cfa008656 Carpinus fangiana HOM05D007138 ORTHO05D009148 1.5e-203 713.8 713 58.9
CiPaw.01G114100 Carya illinoinensis HOM05D007138 ORTHO05D009148 3.5e-192 676.0 710 57.7
MD04G1019900 Malus domestica HOM05D007138 ORTHO05D009148 3.7e-117 426.8 834 38.0
FvH4_4g12980 Fragaria vesca HOM05D007138 ORTHO05D009148 4.0e-111 406.8 856 38.2
FAN12G4162 Fragaria x ananassa HOM05D007138 ORTHO05D009148 1.2e-110 405.2 856 38.1
Thecc.04G192200 Theobroma cacao HOM05D007138 ORTHO05D009148 4.9e-109 399.8 881 36.1
Potri.002G236300 Populus trichocarpa HOM05D007138 ORTHO05D009148 5.6e-105 386.3 881 35.6
Prupe.1G169400 Prunus persica HOM05D007138 ORTHO05D009148 2.1e-104 384.4 715 39.4
RcHm_v2.0_Chr4g0412661 Rosa chinensis HOM05D007138 ORTHO05D009148 4.0e-103 380.2 882 37.0
FAN07G0102 Fragaria x ananassa HOM05D007138 ORTHO05D009148 1.9e-100 371.3 832 37.1
Duzib151G0530 Durio zibethinus HOM05D007138 ORTHO05D009148 5.4e-100 369.8 689 38.5
Sabra02G0180000 Salix brachista HOM05D007138 ORTHO05D009148 8.9e-95 352.4 854 35.8
Gorai.006G224900 Gossypium raimondii HOM05D007138 ORTHO05D009148 9.9e-94 349.0 874 33.6
Gohir.D09G201200 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.3e-93 348.6 875 33.3
Gohir.A09G207700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 4.6e-91 340.1 870 33.3
Dinv27178 Davidia involucrata HOM05D007138 ORTHO05D009148 8.6e-90 335.9 498 46.0
Glyma.08G107400 Glycine max HOM05D007138 ORTHO05D009148 2.8e-88 330.9 754 35.7
Glyma.05G150500 Glycine max HOM05D007138 ORTHO05D009148 8.1e-88 329.3 739 36.0
TWI53G1035 Tripterygium wilfordii HOM05D007138 ORTHO05D009148 2.0e-86 324.7 710 36.3
Atru.chr3.1784 Acer truncatum HOM05D007138 ORTHO05D009148 1.5e-81 308.5 386 47.4
CANSAT78G1621 Cannabis sativa HOM05D007138 ORTHO05D009148 5.6e-81 306.6 713 34.6
Manes.01G054400 Manihot esculenta HOM05D007138 ORTHO05D009148 5.6e-81 306.6 483 41.4
Lj4g0024791 Lotus japonicus HOM05D007138 ORTHO05D009148 9.6e-81 305.8 731 36.8
TAR365G0398 Trochodendron aralioides HOM05D007138 ORTHO05D009148 2.4e-79 301.2 528 41.1
GSVIVG01031579001 Vitis vinifera HOM05D007138 ORTHO05D009148 1.3e-77 295.4 433 44.3
arahy.Tifrunner.gnm1.ann1.JT7ZMS Arachis hypogaea HOM05D007138 ORTHO05D009148 5.4e-76 290.0 705 33.8
Gohir.A02G017700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.0e-74 285.8 821 32.0
Gorai.005G025100 Gossypium raimondii HOM05D007138 ORTHO05D009148 2.5e-73 281.2 848 31.2
Lalb_Chr13g0294671 Lupinus albus HOM05D007138 ORTHO05D009148 9.6e-73 279.3 713 33.9
arahy.Tifrunner.gnm1.ann1.KQUG48 Arachis hypogaea HOM05D007138 ORTHO05D009148 6.2e-72 276.6 707 33.0
Gohir.D02G019900 Gossypium hirsutum HOM05D007138 ORTHO05D009148 9.0e-71 272.7 841 30.8
Medtr8g083310 Medicago truncatula HOM05D007138 ORTHO05D009148 5.8e-70 270.0 717 34.0
ClCG06G003170 Citrullus lanatus HOM05D007138 ORTHO05D009148 1.2e-67 262.3 850 31.1
Ciclev10004866m.g Citrus clementina HOM05D007138 ORTHO05D009148 2.1e-67 261.5 425 41.4
Hma1.2p1_1457F.1_g284650 Hydrangea macrophylla HOM05D007138 ORTHO05D009148 7.9e-67 259.6 363 45.7
Cpa.g.sc157.22 Carica papaya HOM05D007138 ORTHO05D009148 3.9e-66 257.3 486 38.7
CsaV3_6G009270 Cucumis sativus L. HOM05D007138 ORTHO05D009148 7.4e-65 253.1 804 31.0
Psat0s4823g0040 Pisum sativum HOM05D007138 ORTHO05D009148 2.8e-64 251.1 771 31.0
Eucgr.H02635 Eucalyptus grandis HOM05D007138 ORTHO05D009148 3.1e-63 247.7 680 31.8
Lalb_Chr12g0205841 Lupinus albus HOM05D007138 ORTHO05D009148 4.0e-63 247.3 370 43.8
Nn1g08135 Nelumbo nucifera HOM05D007138 ORTHO05D009148 9.0e-63 246.1 472 36.9
TPR.G11960 Trifolium pratense HOM05D000150 ORTHO05D000108 9.0e-63 246.1 654 31.5
Ca_18004_v3 Cicer arietinum L. HOM05D007138 ORTHO05D009148 2.5e-60 238.0 703 32.0
Phvul.003G291400 Phaseolus vulgaris HOM05D007138 ORTHO05D009148 2.5e-60 238.0 706 32.6
Hund25334 Selenicereus undatus HOM05D007138 ORTHO05D009148 3.5e-59 234.2 445 36.6
Sed0014888 Sechium edule HOM05D007138 ORTHO05D009148 1.5e-57 228.8 772 31.2
Cc03_g09210 Coffea canephora HOM05D007138 ORTHO05D009148 3.7e-56 224.2 529 33.5
MSTRG.9782 Avicennia marina HOM05D007138 ORTHO05D009148 6.9e-55 219.9 535 33.1
AUR62020894 Chenopodium quinoa HOM05D007138 ORTHO05D009148 3.4e-54 217.6 464 37.3
Sc13g0000510 Simmondsia chinensis HOM05D007138 ORTHO05D009148 1.4e-52 212.2 491 32.6
Aqoxy2G03906 Aquilegia oxysepala HOM05D007138 ORTHO05D009148 2.5e-52 211.5 839 30.0
AUR62018524 Chenopodium quinoa HOM05D007138 ORTHO05D009148 2.5e-52 211.5 484 33.9
EL10Ac3g07428 Beta vulgaris HOM05D007138 ORTHO05D009148 1.6e-51 208.8 400 36.0
Oeu034315.1 Olea europaea HOM05D007138 ORTHO05D009148 2.7e-51 208.0 630 30.6
PGR083G1257 Punica granatum HOM05D007138 ORTHO05D009148 1.0e-50 206.1 828 28.1
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 9.7e-49 199.5 947 26.8
ECA233G0560 Erigeron canadensis HOM05D007138 ORTHO05D009148 2.4e-47 194.9 574 31.2
SalBow2G2858 Salvia bowleyana HOM05D007138 ORTHO05D009148 5.3e-47 193.7 781 28.6
Sp3g21450 Schrenkiella parvula HOM05D007138 ORTHO05D009148 1.3e-45 189.1 355 36.3
Migut.G00946 Erythranthe guttata HOM05D007138 ORTHO05D009148 2.2e-45 188.3 415 35.2
SalBow2G0985 Salvia bowleyana HOM05D007138 ORTHO05D009148 2.9e-45 188.0 368 38.3
VMungo0251G1281 Vigna mungo HOM05D007138 ORTHO05D009148 3.2e-44 184.5 242 47.5
THA.LOC104804782 Tarenaya hassleriana HOM05D007138 ORTHO05D009148 5.5e-44 183.7 381 35.4
Nitab4.5_0000037g0170 Nicotiana tabacum HOM05D007138 ORTHO05D009148 7.2e-44 183.3 920 26.5
BcaB06g26533 Brassica carinata HOM05D007138 ORTHO05D009148 3.6e-43 181.0 359 35.4
Lsat_1_v5_gn_6_59601 Lactuca sativa HOM05D007138 ORTHO05D009148 6.1e-43 180.3 465 31.2
CARHR099730 Cardamine hirsuta HOM05D007138 ORTHO05D009148 7.9e-43 179.9 466 32.6
MELO3C021153.2 Cucumis melo HOM05D007138 ORTHO05D009148 7.9e-43 179.9 249 46.6
BcaC06g35563 Brassica carinata HOM05D007138 ORTHO05D009148 6.7e-42 176.8 370 34.6
AT3G23740 Arabidopsis thaliana HOM05D007138 ORTHO05D009148 1.3e-40 172.6 361 34.6
A07p08650 Brassica napus HOM05D007138 ORTHO05D009148 2.2e-40 171.8 369 34.1
BraA07t28655Z Brassica rapa HOM05D007138 ORTHO05D009148 2.2e-40 171.8 369 34.1
C07p13480 Brassica napus HOM05D007138 ORTHO05D009148 4.8e-40 170.6 370 34.3
BolC7t41843H Brassica oleracea HOM05D007138 ORTHO05D009148 4.8e-40 170.6 370 34.3
AL3G38640 Arabidopsis lyrata HOM05D007138 ORTHO05D009148 6.3e-40 170.2 350 34.3
Carub.0003s2404 Capsella rubella HOM05D007138 ORTHO05D009148 1.4e-39 169.1 640 28.4
HanXRQChr02g0058451 Helianthus annuus HOM05D007138 ORTHO05D009148 6.9e-39 166.8 403 33.0
Sopen09g035410 Solanum pennellii HOM05D007138 ORTHO05D009148 1.5e-38 165.6 915 25.7
Solyc09g092510.3 Solanum lycopersicum HOM05D007138 ORTHO05D009148 4.5e-38 164.1 906 25.7
Peaxi162Scf00286g01047 Petunia axillaris HOM05D007138 ORTHO05D009148 1.0e-37 162.9 150 58.0
PGSC0003DMG400021869 Solanum tuberosum HOM05D007138 ORTHO05D009148 5.0e-37 160.6 911 26.1
Ah.04g149560 Amaranthus hybridus HOM05D001269 ORTHO05D001083 6.5e-37 160.2 503 29.6
Thhalv10002448m.g Eutrema salsugineum HOM05D007138 ORTHO05D009148 8.5e-37 159.8 350 34.0
unitig_747.g21666 Utricularia gibba HOM05D007138 ORTHO05D009148 4.7e-35 154.1 364 33.0
Oeu056444.1 Olea europaea HOM05D007138 ORTHO05D009148 3.7e-32 144.4 480 29.0
Aa31LG8G10280 Aethionema arabicum HOM05D007138 ORTHO05D009148 2.6e-30 138.3 565 27.4
Lsat_1_v5_gn_6_58941 Lactuca sativa HOM05D007138 ORTHO05D009148 3.2e-28 131.3 439 30.5
Os01g0101800 Oryza sativa ssp. japonica HOM05D007138 ORTHO05D009148 7.2e-28 130.2 138 49.3
Zm00001eb334100 Zea mays HOM05D007138 ORTHO05D009148 6.7e-26 123.6 205 38.5
Nn1g02395 Nelumbo nucifera HOM05D007138 ORTHO05D009148 3.8e-21 107.8 297 32.0
Zm00001eb127090 Zea mays HOM05D007138 ORTHO05D009148 6.5e-21 107.1 130 43.8
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.6e-19 102.4 171 33.9
CDE09G0581 Ceratophyllum demersum HOM05D007138 ORTHO05D009148 2.1e-19 102.1 373 28.2
Lalb_Chr12g0205851 Lupinus albus HOM05D007138 ORTHO05D009148 1.8e-18 99.0 543 27.4
Ciclev10006158m.g Citrus clementina HOM05D007138 ORTHO05D009148 3.4e-17 94.7 159 37.1
ATR0561G013 Amborella trichopoda HOM05D007138 ORTHO05D009148 1.8e-15 89.0 156 36.5
Atru.chr3.1785 Acer truncatum HOM05D007138 ORTHO05D009148 6.8e-10 70.5 150 31.3
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 2.2e-08 65.5 69 43.5
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 2.4e-07 62.0 134 32.1
Psat6g077920 Pisum sativum HOM05D003208 ORTHO05D009148 1.2e-06 59.7 147 30.6
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 2.0e-06 58.9 162 27.8
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 2.0e-06 58.9 109 34.9
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 7.7e-06 57.0 129 30.2


User provided reference genes

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