Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 1.1e-203 713.0 339 100.0
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 1.3e-164 583.2 317 85.5
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 3.8e-164 581.6 317 85.5
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 8.5e-164 580.5 319 84.0
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 5.5e-163 577.8 319 84.6
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 9.4e-163 577.0 317 84.9
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.1e-162 575.9 320 85.0
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 3.0e-161 572.0 320 81.6
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 8.8e-161 570.5 319 82.1
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.0e-160 569.3 319 81.5
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 3.3e-160 568.5 319 81.5
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 3.3e-160 568.5 319 81.8
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.7e-159 566.2 319 82.4
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 3.7e-159 565.1 326 80.7
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 4.8e-159 564.7 317 83.6
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.1e-158 563.5 326 80.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.1e-158 563.5 319 82.1
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.3e-156 556.6 320 80.9
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.2e-156 555.8 319 82.1
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 3.8e-156 555.1 317 82.0
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 2.5e-155 552.4 318 82.1
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.5e-155 552.4 320 80.9
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 4.2e-155 551.6 319 82.1
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 5.5e-155 551.2 318 81.8
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 9.4e-155 550.4 319 81.5
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.2e-154 550.1 320 79.4
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 2.7e-154 548.9 319 81.2
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 3.6e-154 548.5 331 78.5
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 4.7e-154 548.1 319 82.1
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 4.0e-153 545.0 319 79.9
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.5e-152 543.1 312 81.7
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.6e-152 542.3 319 81.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 5.7e-152 541.2 318 81.8
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 9.7e-152 540.4 322 79.5
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 3.7e-151 538.5 320 78.8
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 3.7e-151 538.5 319 78.4
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 4.8e-151 538.1 320 78.1
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 9.1e-150 533.9 320 78.4
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 4.5e-149 531.6 345 75.1
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 4.5e-149 531.6 319 78.4
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 5.9e-149 531.2 320 80.6
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 2.2e-148 529.3 323 77.4
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.2e-148 529.3 370 71.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 3.8e-148 528.5 319 75.5
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.8e-148 528.5 320 79.7
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 6.5e-148 527.7 383 67.9
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 1.5e-147 526.6 320 76.6
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.1e-146 522.7 320 78.1
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.4e-145 520.0 334 74.9
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.8e-145 519.6 320 75.6
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.8e-145 519.6 320 75.6
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.3e-145 519.2 283 86.2
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 3.0e-145 518.8 320 75.9
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 4.0e-145 518.5 320 75.6
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 8.8e-145 517.3 320 75.6
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.2e-144 516.9 320 75.9
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.5e-144 516.5 320 75.3
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 2.0e-144 516.2 320 76.2
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 2.6e-144 515.8 320 75.3
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 1.3e-143 513.5 320 75.0
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.7e-143 513.1 319 76.2
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 2.2e-143 512.7 319 75.2
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.2e-143 512.7 319 77.1
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.8e-143 512.3 339 74.0
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 4.8e-143 511.5 320 76.2
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 1.1e-142 510.4 320 76.2
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.1e-142 510.4 320 76.2
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 1.8e-142 509.6 320 76.2
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 2.8e-135 485.7 318 73.0
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 2.9e-132 475.7 319 73.4
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 1.2e-130 470.3 321 69.8
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 2.8e-130 469.2 318 68.2
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 3.6e-130 468.8 319 70.2
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 8.0e-130 467.6 445 57.5
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.7e-127 458.8 318 71.4
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.2e-125 453.8 288 76.0
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 5.8e-120 434.9 280 73.6
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 3.7e-119 432.2 313 66.5
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.0e-116 424.1 321 66.7
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 5.0e-116 421.8 339 63.1
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 6.8e-113 411.4 244 77.0
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.1e-110 404.1 232 80.6
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.1e-107 394.0 275 68.7
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 1.6e-106 390.2 232 78.9
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 2.9e-103 379.4 246 72.4
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 3.5e-101 372.5 217 82.0
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 9.3e-94 347.8 251 66.1
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.5e-88 330.5 199 78.9
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 3.5e-85 319.3 317 48.6
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.3e-84 317.4 327 50.2
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 2.8e-82 309.7 315 48.3
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 4.8e-82 308.9 315 49.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.8e-82 308.9 232 66.4
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 3.8e-79 299.3 275 56.0
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.1e-59 234.6 129 86.8
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 5.7e-51 205.7 321 39.3
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 7.4e-51 205.3 228 49.1
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 9.1e-49 198.4 333 37.8
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 7.2e-46 188.7 120 72.5
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 6.5e-39 165.6 89 84.3
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 5.5e-38 162.5 87 87.4
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 2.7e-29 133.7 351 30.8
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.2e-28 129.4 72 80.6
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 8.8e-28 128.6 124 49.2
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 2.0e-27 127.5 318 28.0
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.4e-27 126.7 70 87.1
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.0e-23 115.2 83 69.9
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 4.4e-19 99.8 72 59.7
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-17 92.8 89 52.8
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 5.9e-16 89.4 44 90.9
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 6.1e-13 79.3 36 86.1
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.7e-10 71.2 38 84.2
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 8.3e-10 68.9 36 80.6
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 2.5e-06 57.4 37 73.0
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 2.5e-06 57.4 37 73.0


User provided reference genes

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