Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 5.4e-147 524.2 254 100.0
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 1.0e-84 317.4 255 67.5
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 8.5e-84 314.3 257 65.0
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 3.7e-63 245.7 195 65.1
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 7.0e-62 241.5 254 53.1
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 1.6e-61 240.4 254 53.1
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 3.6e-58 229.2 254 49.6
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 7.0e-54 214.9 255 50.6
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 2.3e-52 209.9 257 49.4
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 2.5e-51 206.5 255 47.5
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 5.6e-51 205.3 258 52.3
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 2.1e-50 203.4 254 49.2
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 1.0e-49 201.1 266 47.0
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 4.0e-49 199.1 259 45.9
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 8.9e-49 198.0 256 48.8
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 1.5e-48 197.2 261 47.1
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 4.4e-48 195.7 273 43.6
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 5.8e-48 195.3 255 46.7
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 4.9e-47 192.2 265 44.2
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 7.0e-46 188.3 254 48.4
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 9.2e-46 188.0 257 46.3
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 2.0e-45 186.8 265 46.4
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 6.0e-45 185.3 262 45.8
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 6.0e-45 185.3 279 42.3
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 2.5e-43 179.9 257 45.1
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 2.5e-43 179.9 254 45.3
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 3.3e-43 179.5 254 45.3
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 5.6e-43 178.7 273 41.4
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 2.1e-42 176.8 263 45.6
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 4.7e-42 175.6 297 39.4
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 6.2e-42 175.3 259 47.1
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 1.5e-40 170.6 259 44.8
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 5.8e-40 168.7 268 43.7
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 5.8e-40 168.7 259 44.8
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 5.8e-40 168.7 258 41.9
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 9.8e-40 167.9 259 42.1
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 2.2e-39 166.8 300 37.7
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 2.9e-39 166.4 254 43.3
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 3.7e-39 166.0 259 44.4
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 6.4e-39 165.2 266 42.1
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 1.1e-38 164.5 263 43.0
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 1.1e-38 164.5 258 42.2
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.4e-38 164.1 259 44.4
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.4e-38 163.3 254 43.3
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 5.4e-38 162.2 254 43.3
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 5.4e-38 162.2 257 41.2
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 7.1e-38 161.8 273 40.7
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.3e-36 157.5 266 42.1
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 2.3e-36 156.8 258 41.5
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 2.3e-36 156.8 252 41.3
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 3.9e-36 156.0 259 39.8
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 1.5e-35 154.1 257 37.7
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 2.5e-35 153.3 264 40.5
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.2e-34 151.0 262 38.5
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 1.1e-33 147.9 262 43.9
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 1.5e-32 144.1 280 39.6
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 8.4e-31 138.3 266 38.7
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.1e-30 137.9 239 39.7
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 4.1e-30 136.0 243 39.9
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 5.4e-30 135.6 255 36.9
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 1.6e-29 134.0 203 42.9
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 8.6e-28 128.3 259 35.9
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 4.3e-27 125.9 80 66.2
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 7.3e-27 125.2 283 35.3
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 4.0e-25 119.4 199 40.2
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 2.0e-24 117.1 288 34.4
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 5.8e-24 115.5 264 33.0
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 5.4e-22 109.0 280 35.0
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 9.3e-22 108.2 82 61.0
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.6e-21 107.5 282 33.3
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 2.7e-21 106.7 275 34.2
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 3.5e-21 106.3 150 50.0
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 4.6e-21 105.9 78 60.3
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 6.0e-21 105.5 233 33.5
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 6.0e-21 105.5 75 65.3
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 7.8e-21 105.1 85 64.7
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 1.3e-20 104.4 268 31.0
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 1.3e-20 104.4 284 32.7
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 1.3e-20 104.4 82 59.8
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 3.0e-20 103.2 154 42.9
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 8.7e-20 101.7 71 63.4
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 7.3e-19 98.6 82 56.1
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 7.3e-19 98.6 287 32.4
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 3.6e-18 96.3 287 32.8
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 8.1e-18 95.1 93 50.5
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 1.1e-17 94.7 286 32.5
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 2.4e-17 93.6 223 33.6
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 3.1e-17 93.2 289 31.8
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 4.0e-17 92.8 281 32.7
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 5.3e-17 92.4 288 31.6
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 2.9e-15 86.7 283 30.7
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 8.4e-15 85.1 180 33.3
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 3.2e-14 83.2 198 27.8
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 1.6e-13 80.9 90 42.2
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.0e-12 78.2 40 77.5
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 5.6e-11 72.4 81 49.4
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 9.6e-11 71.6 140 37.1
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 6.9e-09 65.5 141 36.9
Glyma.20G197900 Glycine max HOM05D007349 ORTHO05D009317 2.6e-08 63.5 143 37.1
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 4.9e-07 59.3 70 44.3


User provided reference genes

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