Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p023224 Quercus lobata HOM05D005047 ORTHO05D006540 1.4e-65 252.7 117 100.0
Haze_11554 Corylus avellana HOM05D005047 ORTHO05D006540 4.1e-57 224.6 113 91.2
CiPaw.01G126600 Carya illinoinensis HOM05D005047 ORTHO05D006540 2.9e-55 218.4 110 90.0
Hma1.2p1_0903F.1_g235140 Hydrangea macrophylla HOM05D005047 ORTHO05D006540 2.5e-54 215.3 115 84.3
Dinv38281 Davidia involucrata HOM05D005047 ORTHO05D006540 5.5e-54 214.2 113 85.8
GSVIVG01029046001 Vitis vinifera HOM05D005047 ORTHO05D006540 7.2e-54 213.8 113 85.0
Lj6A611T47 Lonicera japonica HOM05D005047 ORTHO05D006540 1.6e-53 212.6 113 84.1
Atru.chr4.1794 Acer truncatum HOM05D005047 ORTHO05D006540 2.1e-53 212.2 113 84.1
Ciclev10005905m.g Citrus clementina HOM05D005047 ORTHO05D006540 6.1e-53 210.7 112 84.8
Oeu006715.2 Olea europaea HOM05D005047 ORTHO05D006540 8.0e-53 210.3 115 81.7
Sabra03G0128700 Salix brachista HOM05D005047 ORTHO05D006540 1.4e-52 209.5 114 85.1
MD13G1230900 Malus domestica HOM05D005047 ORTHO05D006540 2.3e-52 208.8 112 82.1
Gohir.A09G202200 Gossypium hirsutum HOM05D005047 ORTHO05D006540 3.0e-52 208.4 107 86.9
Gohir.D09G196200 Gossypium hirsutum HOM05D005047 ORTHO05D006540 3.0e-52 208.4 107 86.9
Gorai.006G219600 Gossypium raimondii HOM05D005047 ORTHO05D006540 3.0e-52 208.4 107 86.9
Lalb_Chr01g0010841 Lupinus albus HOM05D005047 ORTHO05D006540 3.0e-52 208.4 110 86.4
RcHm_v2.0_Chr4g0396911 Rosa chinensis HOM05D005047 ORTHO05D006540 4.0e-52 208.0 110 84.5
COL.COLO4_34082 Corchorus olitorius HOM05D005047 ORTHO05D006540 5.2e-52 207.6 107 87.9
PGR142G1511 Punica granatum HOM05D005047 ORTHO05D006540 5.2e-52 207.6 110 85.5
Thecc.04G211900 Theobroma cacao HOM05D005047 ORTHO05D006540 6.7e-52 207.2 107 86.9
Duzib212G0386 Durio zibethinus HOM05D005047 ORTHO05D006540 1.2e-51 206.5 107 86.0
CSS0002501 Camellia sinensis var. sinensis HOM05D005047 ORTHO05D006540 1.5e-51 206.1 113 78.8
Cpa.g.sc59.91 Carica papaya HOM05D005047 ORTHO05D006540 3.3e-51 204.9 107 86.0
Cc03_g07220 Coffea canephora HOM05D005047 ORTHO05D006540 3.3e-51 204.9 113 80.5
Glyma.10G125100 Glycine max HOM05D005047 ORTHO05D006540 3.3e-51 204.9 109 83.5
Phvul.007G236950 Phaseolus vulgaris HOM05D005047 ORTHO05D006540 3.3e-51 204.9 110 81.8
TWI73G0442 Tripterygium wilfordii HOM05D005047 ORTHO05D006540 3.3e-51 204.9 107 87.9
PSO782G5131 Papaver somniferum HOM05D005047 ORTHO05D006540 4.4e-51 204.5 112 81.2
Medtr1g047390 Medicago truncatula HOM05D005047 ORTHO05D006540 5.7e-51 204.1 109 83.5
PSO478G4795 Papaver somniferum HOM05D005047 ORTHO05D006540 5.7e-51 204.1 112 82.1
SalBow3G2150 Salvia bowleyana HOM05D005047 ORTHO05D006540 5.7e-51 204.1 109 82.6
TPR.G10100 Trifolium pratense HOM05D005047 ORTHO05D006540 5.7e-51 204.1 109 84.4
CARHR219510 Cardamine hirsuta HOM05D005047 ORTHO05D006540 7.5e-51 203.8 110 80.9
HanXRQChr01g0022691 Helianthus annuus HOM05D005047 ORTHO05D006540 9.7e-51 203.4 109 81.7
Potri.003G175800 Populus trichocarpa HOM05D005047 ORTHO05D006540 1.3e-50 203.0 112 83.9
CANSAT78G0753 Cannabis sativa HOM05D005047 ORTHO05D006540 1.7e-50 202.6 108 84.3
CANSAT78G2209 Cannabis sativa HOM05D005047 ORTHO05D006540 1.7e-50 202.6 108 84.3
Eucgr.H00094 Eucalyptus grandis HOM05D005047 ORTHO05D006540 1.7e-50 202.6 111 82.9
Potri.001G052400 Populus trichocarpa HOM05D005047 ORTHO05D006540 1.7e-50 202.6 108 85.2
arahy.Tifrunner.gnm1.ann1.0X932T Arachis hypogaea HOM05D005047 ORTHO05D006540 2.2e-50 202.2 112 79.5
Sed0007809 Sechium edule HOM05D005047 ORTHO05D006540 2.2e-50 202.2 109 82.6
Ca_11862_v3 Cicer arietinum L. HOM05D005047 ORTHO05D006540 2.8e-50 201.8 109 83.5
Lj6g0004838 Lotus japonicus HOM05D005047 ORTHO05D006540 3.7e-50 201.4 110 81.8
Glyma.20G077400 Glycine max HOM05D005047 ORTHO05D006540 4.8e-50 201.1 109 80.7
Psat6g048720 Pisum sativum HOM05D005047 ORTHO05D006540 4.8e-50 201.1 108 83.3
SGA_v2.0_scaffold2G00831 Striga asiatica HOM05D005047 ORTHO05D006540 8.2e-50 200.3 111 82.0
Prupe.1G060800 Prunus persica HOM05D005047 ORTHO05D006540 1.4e-49 199.5 110 80.9
Aa31LG9G3930 Aethionema arabicum HOM05D005047 ORTHO05D006540 3.1e-49 198.4 108 80.6
Migut.N00337 Erythranthe guttata HOM05D005047 ORTHO05D006540 3.1e-49 198.4 111 80.2
TAR633G1642 Trochodendron aralioides HOM05D005047 ORTHO05D006540 3.1e-49 198.4 116 80.2
Peaxi162Scf00047g01312 Petunia axillaris HOM05D005047 ORTHO05D006540 5.3e-49 197.6 113 77.0
EL10Ac3g06787 Beta vulgaris HOM05D005047 ORTHO05D006540 7.0e-49 197.2 107 83.2
ECA248G2813 Erigeron canadensis HOM05D005047 ORTHO05D006540 7.0e-49 197.2 107 80.4
AT4G13720 Arabidopsis thaliana HOM05D005047 ORTHO05D006540 9.1e-49 196.8 108 80.6
AL7G42780 Arabidopsis lyrata HOM05D005047 ORTHO05D006540 1.2e-48 196.4 108 80.6
THA.LOC104808728 Tarenaya hassleriana HOM05D005047 ORTHO05D006540 1.2e-48 196.4 107 81.3
BcaB02g08656 Brassica carinata HOM05D005047 ORTHO05D006540 2.0e-48 195.7 108 79.6
Sc13g0002770 Simmondsia chinensis HOM05D005047 ORTHO05D006540 2.0e-48 195.7 107 81.3
Carub.0007s2874 Capsella rubella HOM05D005047 ORTHO05D006540 2.7e-48 195.3 108 80.6
CDE04G3429 Ceratophyllum demersum HOM05D005047 ORTHO05D006540 3.5e-48 194.9 108 80.6
Thhalv10026260m.g Eutrema salsugineum HOM05D005047 ORTHO05D006540 4.5e-48 194.5 108 78.7
Lsat_1_v5_gn_0_4860 Lactuca sativa HOM05D005047 ORTHO05D006540 4.5e-48 194.5 106 80.2
Nitab4.5_0010267g0010 Nicotiana tabacum HOM05D005047 ORTHO05D006540 4.5e-48 194.5 108 80.6
Sp7g11500 Schrenkiella parvula HOM05D005047 ORTHO05D006540 4.5e-48 194.5 108 78.7
BcaC02g09395 Brassica carinata HOM05D005047 ORTHO05D006540 1.0e-47 193.4 108 78.7
CAN.G500.97 Capsicum annuum HOM05D005047 ORTHO05D006540 1.3e-47 193.0 108 79.6
AL5G12130 Arabidopsis lyrata HOM05D005047 ORTHO05D006540 1.7e-47 192.6 108 78.7
Sopen09g034350 Solanum pennellii HOM05D005047 ORTHO05D006540 1.7e-47 192.6 108 79.6
Aqoxy2G03810 Aquilegia oxysepala HOM05D005047 ORTHO05D006540 2.9e-47 191.8 105 80.0
Nn3g19880 Nelumbo nucifera HOM05D005047 ORTHO05D006540 2.9e-47 191.8 108 79.6
Nitab4.5_0010728g0010 Nicotiana tabacum HOM05D005047 ORTHO05D006540 2.9e-47 191.8 112 76.8
HPP92_015205 Vanilla planifolia HOM05D005047 ORTHO05D006540 2.9e-47 191.8 105 80.0
A04p08470 Brassica napus HOM05D005047 ORTHO05D006540 5.0e-47 191.0 109 78.9
C04p42210 Brassica napus HOM05D005047 ORTHO05D006540 5.0e-47 191.0 109 78.9
BolC4t25799H Brassica oleracea HOM05D005047 ORTHO05D006540 5.0e-47 191.0 109 78.9
BraA04t16537Z Brassica rapa HOM05D005047 ORTHO05D006540 5.0e-47 191.0 109 78.9
CsaV3_3G011290 Cucumis sativus L. HOM05D005047 ORTHO05D006540 5.0e-47 191.0 106 81.1
Solyc09g091420.4 Solanum lycopersicum HOM05D005047 ORTHO05D006540 8.5e-47 190.3 108 78.7
PGSC0003DMG400029615 Solanum tuberosum HOM05D005047 ORTHO05D006540 1.5e-46 189.5 108 78.7
VMungo0720G0344 Vigna mungo HOM05D005047 ORTHO05D006540 7.2e-46 187.2 100 83.0
Hund19253 Selenicereus undatus HOM05D005047 ORTHO05D006540 2.1e-45 185.7 101 84.2
vmacro00514 Vaccinium macrocarpon HOM05D005047 ORTHO05D006540 2.1e-45 185.7 106 79.2
Zm00001eb046670 Zea mays HOM05D005047 ORTHO05D006540 3.6e-45 184.9 112 74.1
FAN07G0410 Fragaria x ananassa HOM05D005047 ORTHO05D006540 8.0e-45 183.7 103 81.6
FAN12G1457 Fragaria x ananassa HOM05D005047 ORTHO05D006540 1.0e-44 183.3 103 81.6
Rhsim09G0049500 Rhododendron simsii HOM05D005047 ORTHO05D006540 4.0e-44 181.4 106 76.4
Zm00001eb377030 Zea mays HOM05D005047 ORTHO05D006540 5.2e-44 181.0 112 72.3
Manes.03G152700 Manihot esculenta HOM05D005047 ORTHO05D006540 6.8e-44 180.6 112 73.2
Aa31LG9G3940 Aethionema arabicum HOM05D005047 ORTHO05D006540 1.2e-43 179.9 107 73.8
MBI07_g19553_MAGBIO Magnolia biondii HOM05D005047 ORTHO05D006540 2.6e-43 178.7 133 64.7
arahy.Tifrunner.gnm1.ann1.BK86JE Arachis hypogaea HOM05D005047 ORTHO05D006540 5.7e-43 177.6 100 80.0
Manes.15G048800 Manihot esculenta HOM05D005047 ORTHO05D006540 1.3e-42 176.4 112 72.3
Os10g0457500 Oryza sativa ssp. japonica HOM05D005047 ORTHO05D006540 4.8e-42 174.5 105 72.4
AUR62032663 Chenopodium quinoa HOM05D005047 ORTHO05D006540 6.3e-42 174.1 100 79.0
unitig_749.g13975 Utricularia gibba HOM05D005047 ORTHO05D006540 8.3e-42 173.7 111 69.4
Mapoly0026s0018 Marchantia polymorpha HOM05D005047 ORTHO05D006540 1.4e-41 172.9 105 74.3
SMO367G0232 Selaginella moellendorffii HOM05D005047 ORTHO05D006540 1.4e-41 172.9 112 69.6
Dinv29555 Davidia involucrata HOM05D005047 ORTHO05D006540 1.8e-41 172.6 101 80.2
Ah.13g075240 Amaranthus hybridus HOM05D005047 ORTHO05D006540 7.0e-41 170.6 101 76.2
ATR0088G035 Amborella trichopoda HOM05D005047 ORTHO05D006540 7.0e-41 170.6 95 81.1
ClCG05G003600 Citrullus lanatus HOM05D005047 ORTHO05D006540 1.2e-40 169.9 102 76.5
Actinidia37393 Actinidia chinensis HOM05D005047 ORTHO05D006540 1.0e-39 166.8 117 69.2
Carub.0007s2873 Capsella rubella HOM05D005047 ORTHO05D006540 2.5e-38 162.2 92 79.3
AagrBONN_evm.TU.Sc2ySwM_344.3277 Anthoceros agrestis HOM05D005047 ORTHO05D006540 1.2e-37 159.8 99 72.7
Pp3c16_19640 Physcomitrium patens HOM05D005047 ORTHO05D006540 4.0e-36 154.8 108 67.6
Zm00001eb177140 Zea mays HOM05D005047 ORTHO05D006540 8.9e-36 153.7 101 69.3
TWI09G0343 Tripterygium wilfordii HOM05D005047 ORTHO05D006540 2.0e-35 152.5 96 75.0
AUR62035305 Chenopodium quinoa HOM05D005047 ORTHO05D006540 2.4e-33 145.6 163 48.5
MCO04G006 Micromonas commoda HOM05D005047 ORTHO05D006540 5.4e-33 144.4 93 66.7
Zm00001eb102100 Zea mays HOM05D005047 ORTHO05D006540 5.4e-33 144.4 112 62.5
Zm00001eb086240 Zea mays HOM05D005047 ORTHO05D006540 4.5e-32 141.4 76 78.9
Cre02.g095089 Chlamydomonas reinhardtii HOM05D005047 ORTHO05D006540 8.6e-31 137.1 99 57.6
Zm00001eb180620 Zea mays HOM05D005047 ORTHO05D006540 1.2e-29 133.3 86 68.6
Zm00001eb425490 Zea mays HOM05D005047 ORTHO05D006540 2.1e-29 132.5 74 75.7
SHI24117 Sapria himalayana HOM05D005047 ORTHO05D006540 3.0e-28 128.6 106 57.5
PRCOL_00006994 Prasinoderma coloniale HOM05D005047 ORTHO05D006540 4.0e-28 128.3 100 57.0
Cfa024488 Carpinus fangiana HOM05D005047 ORTHO05D006540 6.0e-24 114.4 98 52.0
FAN17G1156 Fragaria x ananassa HOM05D005047 ORTHO05D006540 1.0e-23 113.6 68 76.5
Cre13.g568950 Chlamydomonas reinhardtii HOM05D005047 ORTHO05D006540 9.5e-22 107.1 102 48.0
Sed0007961 Sechium edule HOM05D005047 ORTHO05D006540 2.0e-19 99.4 108 52.8
SEGI_09208 Sequoiadendron giganteum HOM05D005047 ORTHO05D006540 2.2e-18 95.9 64 70.3
Sabra01G0036900 Salix brachista HOM05D005047 ORTHO05D006540 3.7e-18 95.1 48 87.5
Medtr1g047400 Medicago truncatula HOM05D005047 ORTHO05D006540 6.0e-16 87.8 61 72.1
CBR_g49288 Chara braunii HOM05D005047 ORTHO05D006540 3.3e-14 82.0 54 66.7
arahy.Tifrunner.gnm1.ann1.FRRS2Q Arachis hypogaea HOM05D005047 ORTHO05D084578 2.6e-11 72.4 68 54.4
EL10Ac7g17560 Beta vulgaris HOM05D005047 ORTHO05D006373 2.2e-10 69.3 37 81.1
EL10Ac6g14438 Beta vulgaris HOM05D005047 ORTHO05D006540 1.1e-09 67.0 37 78.4


User provided reference genes

Program Settings