Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p023072 Quercus lobata HOM05D000611 ORTHO05D004334 3.2e-37 157.9 80 100.0
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 1.9e-13 79.0 62 64.5
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 4.2e-13 77.8 62 64.5
TAR622G0440 Trochodendron aralioides HOM05D000611 ORTHO05D004334 5.5e-13 77.4 61 63.9
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 7.2e-13 77.0 62 59.7
Actinidia22792 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.2e-12 76.3 62 64.5
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 1.2e-12 76.3 62 64.5
Potri.017G126700 Populus trichocarpa HOM05D000611 ORTHO05D004334 2.1e-12 75.5 83 51.8
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 2.7e-12 75.1 62 61.3
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 3.6e-12 74.7 62 61.3
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 4.7e-12 74.3 62 62.9
CANSAT78G1071 Cannabis sativa HOM05D000611 ORTHO05D004334 4.7e-12 74.3 62 58.1
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 4.7e-12 74.3 62 61.3
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 4.7e-12 74.3 62 62.9
QL11p003934 Quercus lobata HOM05D000611 ORTHO05D004334 4.7e-12 74.3 61 60.7
CSS0039210 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 8.0e-12 73.6 62 61.3
Cfa007833 Carpinus fangiana HOM05D000611 ORTHO05D004334 8.0e-12 73.6 65 56.9
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 8.0e-12 73.6 59 66.1
Haze_14232 Corylus avellana HOM05D000611 ORTHO05D004334 8.0e-12 73.6 65 56.9
Atru.chr1.1837 Acer truncatum HOM05D000611 ORTHO05D004334 1.0e-11 73.2 65 56.9
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 1.8e-11 72.4 62 61.3
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 1.8e-11 72.4 63 60.3
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 4.0e-11 71.2 62 59.7
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 4.0e-11 71.2 62 61.3
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 5.2e-11 70.9 62 59.7
TWI18G1238 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 5.2e-11 70.9 59 61.0
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 6.7e-11 70.5 62 59.7
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 8.8e-11 70.1 62 59.7
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 8.8e-11 70.1 62 58.1
Eucgr.J01547 Eucalyptus grandis HOM05D000611 ORTHO05D004334 1.5e-10 69.3 62 56.5
Sabra15G0047000 Salix brachista HOM05D000949 ORTHO05D004334 1.5e-10 69.3 64 54.7
Sabra17G0106600 Salix brachista HOM05D000611 ORTHO05D004334 1.5e-10 69.3 64 54.7
TAR374G0184 Trochodendron aralioides HOM05D000611 ORTHO05D004334 2.0e-10 68.9 60 61.7
MBI16_g23759_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 2.6e-10 68.6 61 59.0
QL11p039394 Quercus lobata HOM05D000611 ORTHO05D004334 3.3e-10 68.2 62 58.1
EL10Ac2g04473 Beta vulgaris HOM05D000611 ORTHO05D004334 7.5e-10 67.0 65 55.4
Gohir.A12G056200 Gossypium hirsutum HOM05D000611 ORTHO05D004334 7.5e-10 67.0 62 56.5
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 9.7e-10 66.6 62 56.5
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 9.7e-10 66.6 62 56.5
Gorai.010G046100 Gossypium raimondii HOM05D000611 ORTHO05D004334 9.7e-10 66.6 62 56.5
AUR62023184 Chenopodium quinoa HOM05D000611 ORTHO05D004334 1.3e-09 66.2 61 57.4
COL.COLO4_15730 Corchorus olitorius HOM05D000611 ORTHO05D004334 1.3e-09 66.2 59 57.6
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 1.3e-09 66.2 62 53.2
Actinidia36368 Actinidia chinensis HOM05D000611 ORTHO05D004334 2.2e-09 65.5 72 52.8
AUR62023231 Chenopodium quinoa HOM05D000611 ORTHO05D004334 2.8e-09 65.1 61 55.7
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 2.8e-09 65.1 65 52.3
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 2.8e-09 65.1 62 54.8
Phvul.008G234500 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 2.8e-09 65.1 62 51.6
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 3.7e-09 64.7 62 53.2
PSO017G0779 Papaver somniferum HOM05D000611 ORTHO05D004334 3.7e-09 64.7 61 54.1
Sc15g0002490 Simmondsia chinensis HOM05D000611 ORTHO05D004334 3.7e-09 64.7 61 50.8
Nn3g20745 Nelumbo nucifera HOM05D000611 ORTHO05D004334 4.8e-09 64.3 65 53.8
TWI12G1101 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 4.8e-09 64.3 63 54.0
Nn4g24174 Nelumbo nucifera HOM05D000611 ORTHO05D004334 6.3e-09 63.9 65 52.3
Phvul.008G234400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 6.3e-09 63.9 62 56.5
Lalb_Chr20g0116941 Lupinus albus HOM05D000611 ORTHO05D004334 8.2e-09 63.5 65 52.3
Haze_12064 Corylus avellana HOM05D000611 ORTHO05D004334 1.1e-08 63.2 59 57.6
Eucgr.J01631 Eucalyptus grandis HOM05D000611 ORTHO05D004334 1.1e-08 63.2 62 54.8
ATR0598G054 Amborella trichopoda HOM05D000611 ORTHO05D004334 1.4e-08 62.8 59 55.9
VMungo0647G1718 Vigna mungo HOM05D000611 ORTHO05D004334 1.4e-08 62.8 62 54.8
TAR622G0324 Trochodendron aralioides HOM05D000611 ORTHO05D004334 1.8e-08 62.4 52 61.5
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 3.1e-08 61.6 65 50.8
Migut.L00463 Erythranthe guttata HOM05D000611 ORTHO05D004334 3.1e-08 61.6 66 48.5
AUR62012480 Chenopodium quinoa HOM05D000611 ORTHO05D004334 5.3e-08 60.8 60 51.7
PSO170G2195 Papaver somniferum HOM05D000611 ORTHO05D004334 5.3e-08 60.8 61 52.5
QL09p038966 Quercus lobata HOM05D000611 ORTHO05D004334 5.3e-08 60.8 61 54.1
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 5.3e-08 60.8 62 51.6
Glyma.14G069800 Glycine max HOM05D000611 ORTHO05D004334 1.2e-07 59.7 58 51.7
vmacro22900 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.6e-07 59.3 62 46.8
Aqoxy3G00114 Aquilegia oxysepala HOM05D000611 ORTHO05D004334 2.0e-07 58.9 59 50.8
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.0e-07 58.9 62 46.8
Cfa009035 Carpinus fangiana HOM05D000611 ORTHO05D004334 2.7e-07 58.5 59 55.9
EL10Ac1g01296 Beta vulgaris HOM05D000611 ORTHO05D004334 5.9e-07 57.4 61 50.8
Sed0014398 Sechium edule HOM05D000611 ORTHO05D004334 5.9e-07 57.4 61 47.5
MD09G1262200 Malus domestica HOM05D000611 ORTHO05D004334 7.7e-07 57.0 61 49.2
Psat2g041880 Pisum sativum HOM05D000611 ORTHO05D004334 1.0e-06 56.6 66 45.5
SGA_v2.0_scaffold63G21737 Striga asiatica HOM05D000611 ORTHO05D004334 1.0e-06 56.6 64 46.9
TWI60G0311 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 1.3e-06 56.2 59 52.5
Lalb_Chr02g0154471 Lupinus albus HOM05D000611 ORTHO05D004334 1.7e-06 55.8 57 52.6
MD17G1257100 Malus domestica HOM05D000611 ORTHO05D004334 1.7e-06 55.8 61 45.9
arahy.Tifrunner.gnm1.ann1.J7PSRM Arachis hypogaea HOM05D000611 ORTHO05D004334 2.2e-06 55.5 60 50.0
Glyma.11G217600 Glycine max HOM05D000611 ORTHO05D004334 2.2e-06 55.5 60 48.3
LjContig00141g0016319 Lotus japonicus HOM05D000611 ORTHO05D004334 2.2e-06 55.5 60 50.0
MBI10_g08554_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 2.2e-06 55.5 67 47.8
CSS0013647 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 2.9e-06 55.1 74 45.9
PGR119G2064 Punica granatum HOM05D000611 ORTHO05D004334 2.9e-06 55.1 61 50.8
THA.LOC104826735 Tarenaya hassleriana HOM05D000611 ORTHO05D004334 5.0e-06 54.3 60 50.0
arahy.Tifrunner.gnm1.ann1.E9G7WB Arachis hypogaea HOM05D000611 ORTHO05D004334 6.5e-06 53.9 61 50.8
arahy.Tifrunner.gnm1.ann1.HDGD4N Arachis hypogaea HOM05D000611 ORTHO05D004334 6.5e-06 53.9 62 45.2
MELO3C020280.2 Cucumis melo HOM05D000611 ORTHO05D004334 6.5e-06 53.9 61 49.2
arahy.Tifrunner.gnm1.ann1.WY3AB3 Arachis hypogaea HOM05D000611 ORTHO05D004334 8.5e-06 53.5 61 50.8
vmacro17597 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 8.5e-06 53.5 61 52.5


User provided reference genes

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