Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.0e-150 535.8 281 100.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 3.2e-124 448.7 279 84.2
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 3.9e-122 441.8 277 83.8
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 8.2e-120 434.1 273 83.5
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.9e-117 425.6 281 79.4
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.4e-116 423.3 281 78.3
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.3e-116 420.6 273 79.1
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 1.2e-115 420.2 265 81.5
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.1e-115 419.5 265 81.9
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 4.6e-115 418.3 273 79.5
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.0e-114 417.2 274 78.5
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.3e-114 416.8 271 78.6
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.8e-114 416.4 273 79.1
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.8e-114 416.4 267 80.1
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.9e-114 415.2 273 79.1
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.6e-112 409.8 284 77.1
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.6e-112 409.8 279 77.1
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 6.3e-112 407.9 279 76.3
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.1e-111 405.2 278 77.3
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.5e-110 401.7 278 76.6
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 4.5e-110 401.7 279 76.7
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.0e-109 400.6 265 78.1
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.7e-109 399.8 267 77.5
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.2e-109 399.4 269 77.3
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 6.5e-109 397.9 277 74.7
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 8.5e-109 397.5 265 77.7
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.1e-108 397.1 269 77.0
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.9e-108 396.4 271 75.3
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 7.2e-108 394.4 280 73.6
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 7.2e-108 394.4 269 76.6
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 9.3e-108 394.0 267 76.4
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 9.3e-108 394.0 265 77.0
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.3e-106 390.2 267 74.5
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.3e-106 389.4 267 74.5
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 3.9e-106 388.7 269 73.6
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 8.7e-106 387.5 269 75.8
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.1e-105 387.1 273 71.1
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.5e-105 386.0 269 75.5
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 2.5e-105 386.0 264 75.4
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 4.3e-105 385.2 271 72.7
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 9.7e-105 384.0 275 69.8
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 2.2e-104 382.9 276 73.6
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.8e-104 382.5 276 73.6
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.8e-104 382.5 269 74.0
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 6.3e-104 381.3 273 70.3
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 6.3e-104 381.3 269 74.3
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.8e-103 379.8 279 69.9
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 3.1e-103 379.0 330 64.8
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 5.3e-103 378.3 273 70.0
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 5.3e-103 378.3 273 69.6
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.2e-102 377.1 273 68.9
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.2e-102 377.1 269 72.1
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.2e-102 377.1 269 71.7
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 1.2e-102 377.1 271 74.2
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.5e-102 376.7 276 68.1
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.5e-102 376.7 264 72.3
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 2.0e-102 376.3 268 75.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 2.0e-102 376.3 273 72.2
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.6e-102 375.9 269 71.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 4.5e-102 375.2 272 72.4
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 5.9e-102 374.8 269 73.2
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.7e-101 373.2 269 71.4
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.7e-101 373.2 269 71.4
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.2e-101 372.9 280 70.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 3.8e-101 372.1 267 73.0
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 8.5e-101 370.9 240 80.4
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.1e-100 370.5 286 69.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.7e-99 365.9 240 80.8
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 7.9e-99 364.4 273 69.2
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.0e-98 364.0 272 69.5
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.4e-98 363.6 273 68.5
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.4e-98 363.6 264 73.1
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.8e-98 363.2 282 70.2
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.3e-98 362.8 274 71.2
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 3.9e-98 362.1 266 72.6
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 6.7e-98 361.3 273 71.8
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 6.7e-98 361.3 267 70.0
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 4.4e-97 358.6 268 69.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 7.4e-97 357.8 279 68.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.3e-96 357.1 276 69.9
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 2.2e-96 356.3 283 68.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.8e-96 355.9 272 69.1
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 5.3e-95 351.7 279 66.7
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 2.0e-94 349.7 268 70.1
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.6e-94 349.4 233 76.8
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 3.2e-92 342.4 224 81.7
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.0e-90 335.9 285 63.9
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.1e-89 334.0 285 63.9
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.5e-89 333.6 291 62.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 8.2e-88 327.8 279 63.4
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.1e-87 327.4 237 73.0
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.8e-87 326.6 264 63.6
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 6.5e-85 318.2 263 62.4
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.5e-84 317.0 222 73.4
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 3.6e-83 312.4 263 60.8
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.0e-82 310.8 232 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.4e-82 310.5 257 61.9
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 6.7e-82 308.1 239 69.5
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.0e-81 306.6 265 63.0
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.9e-76 290.0 389 44.2
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.5e-76 289.7 267 59.6
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.7e-69 266.9 270 54.8
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 9.5e-68 261.2 228 61.4
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 2.6e-65 253.1 260 54.2
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.0e-61 241.1 149 83.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 4.6e-54 215.7 183 67.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 9.5e-52 208.0 238 53.8
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 3.6e-51 206.1 182 66.5
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 1.2e-49 201.1 164 65.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-48 197.6 137 70.8
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 2.5e-44 183.3 217 50.2
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 7.3e-44 181.8 119 79.8
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 3.4e-41 172.9 135 69.6
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 2.2e-40 170.2 136 58.8
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 8.4e-32 141.7 136 61.8
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 4.1e-31 139.4 115 66.1
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 4.1e-31 139.4 207 45.9
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.3e-29 133.7 132 61.4
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.6e-22 109.4 77 74.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.5e-20 103.6 257 31.1
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.3e-20 103.2 79 70.9
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.1e-12 78.2 108 45.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 2.4e-10 70.5 48 66.7


User provided reference genes

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