Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 4.1e-147 524.6 253 100.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.5e-114 415.2 251 79.7
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.1e-110 402.1 220 85.9
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 4.3e-104 381.7 216 81.0
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 7.4e-104 380.9 217 80.2
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.3e-103 380.2 206 84.0
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 4.0e-102 375.2 209 79.4
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 2.6e-101 372.5 207 81.6
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 6.5e-100 367.9 209 80.9
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.6e-98 363.2 224 75.0
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.7e-98 362.5 239 70.7
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.5e-98 362.1 235 70.2
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 6.0e-98 361.3 211 78.2
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 8.2e-95 350.9 208 76.0
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.9e-94 347.8 249 63.9
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 7.6e-93 344.4 231 70.1
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.7e-92 343.2 245 66.9
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.7e-92 343.2 242 67.4
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 3.8e-92 342.0 209 74.2
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.1e-91 340.5 241 67.6
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.1e-90 336.3 209 74.2
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 2.1e-90 336.3 253 66.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.1e-90 336.3 214 72.0
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 6.7e-89 331.3 223 68.6
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.4e-86 322.8 223 67.3
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 5.3e-86 321.6 224 64.7
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.2e-85 320.5 205 72.2
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 3.4e-85 318.9 208 68.8
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.3e-84 317.0 219 65.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.8e-84 315.5 252 60.7
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 8.5e-84 314.3 208 65.4
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.4e-83 313.5 223 64.1
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 3.9e-81 305.4 208 64.9
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 3.9e-81 305.4 208 66.3
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.1e-80 303.9 246 60.6
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 2.6e-80 302.8 208 64.9
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 5.7e-80 301.6 224 62.5
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.7e-79 300.1 200 65.5
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.8e-79 299.3 170 78.2
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.8e-78 296.6 200 65.0
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 6.9e-78 294.7 210 65.2
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 6.5e-76 288.1 200 63.0
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 6.5e-76 288.1 218 57.3
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-72 277.3 202 61.4
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.3e-71 273.9 209 61.2
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 8.2e-71 271.2 124 93.5
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 1.9e-67 260.0 209 56.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.7e-63 246.9 176 60.2
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 1.6e-61 240.4 141 78.7
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.5e-59 233.8 149 70.5
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 2.1e-58 229.9 175 60.0
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.4e-57 227.3 124 82.3
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.2e-56 224.2 204 51.5
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.8e-55 219.5 124 71.8
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 8.3e-55 218.0 128 71.1
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 7.0e-54 214.9 128 71.9
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 3.8e-52 209.1 159 59.7
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 2.5e-51 206.5 241 41.9
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.6e-50 202.6 113 77.0
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 1.0e-49 201.1 125 65.6
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.8e-49 200.3 224 43.8
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 8.9e-49 198.0 206 48.1
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 6.3e-47 191.8 107 75.7
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 6.3e-47 191.8 116 74.1
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 2.7e-45 186.4 103 73.8
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 8.9e-41 171.4 160 50.6
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 2.2e-39 166.8 143 59.4
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 4.9e-39 165.6 103 72.8
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 6.4e-39 165.2 120 60.8
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 1.4e-38 164.1 98 69.4
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 1.2e-37 161.0 86 81.4
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.7e-37 159.8 98 68.4
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.0e-36 156.4 200 38.0
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 6.6e-36 155.2 216 39.4
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.5e-35 154.1 106 59.4
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.0e-33 146.0 201 38.3
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 1.5e-27 127.5 116 59.5
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.6e-26 124.0 192 34.9
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.7e-26 122.5 184 35.9
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.1e-25 121.3 199 38.7
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.1e-25 121.3 198 34.3
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 8.9e-25 118.2 73 65.8
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.1e-20 102.4 99 48.5
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 1.5e-16 90.9 62 71.0
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.2e-13 81.3 127 39.4
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 3.5e-13 79.7 231 28.6
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 3.0e-12 76.6 47 78.7
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 3.3e-11 73.2 81 48.1
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 9.6e-11 71.6 63 57.1
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 8.1e-10 68.6 63 55.6
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.1e-09 66.6 65 55.4
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 9.0e-09 65.1 75 45.3
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.5e-08 64.3 48 68.8
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 5.8e-08 62.4 48 64.6
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.7e-07 60.8 36 77.8
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 1.7e-07 60.8 122 36.1
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 3.8e-07 59.7 64 46.9


User provided reference genes

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