Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.3e-87 325.5 160 100.0
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 3.9e-42 175.3 102 83.3
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 1.5e-41 173.3 108 77.8
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 7.3e-41 171.0 102 80.4
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 7.3e-41 171.0 108 75.9
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 9.6e-41 170.6 108 75.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.2e-40 170.2 102 79.4
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 2.1e-40 169.5 99 77.8
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 2.1e-40 169.5 99 77.8
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.8e-40 169.1 96 80.2
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.8e-40 169.1 102 78.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.8e-40 169.1 96 82.3
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 3.6e-40 168.7 99 77.8
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 3.6e-40 168.7 99 77.8
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 3.6e-40 168.7 106 71.7
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 3.6e-40 168.7 106 71.7
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 4.7e-40 168.3 99 76.8
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.7e-40 168.3 106 72.6
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 4.7e-40 168.3 108 75.9
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 6.2e-40 167.9 99 76.8
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 6.2e-40 167.9 108 74.1
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 6.2e-40 167.9 108 71.3
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 8.1e-40 167.5 105 73.3
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 8.1e-40 167.5 99 78.8
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.1e-39 167.2 99 76.8
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.1e-39 167.2 106 75.5
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.4e-39 166.8 99 75.8
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 1.8e-39 166.4 96 79.2
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 2.4e-39 166.0 96 80.2
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 5.3e-39 164.9 111 75.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 5.3e-39 164.9 102 76.5
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 6.9e-39 164.5 99 75.8
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 6.9e-39 164.5 99 75.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 6.9e-39 164.5 101 73.3
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 6.9e-39 164.5 108 72.2
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 9.0e-39 164.1 108 71.3
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 9.0e-39 164.1 108 73.1
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.5e-38 163.3 96 80.2
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.5e-38 163.3 96 80.2
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.5e-38 163.3 103 72.8
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.6e-38 162.5 96 80.2
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.4e-38 162.2 106 69.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 3.4e-38 162.2 96 78.1
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.4e-38 162.2 108 72.2
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 5.8e-38 161.4 104 74.0
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.6e-38 161.0 96 79.2
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 7.6e-38 161.0 108 71.3
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.3e-37 160.2 106 68.9
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.3e-37 160.2 96 76.0
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.7e-37 159.8 104 71.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.7e-37 159.8 103 73.8
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.2e-37 159.5 96 76.0
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.9e-37 159.1 101 74.3
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 3.8e-37 158.7 104 72.1
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 4.9e-37 158.3 107 69.2
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 6.4e-37 157.9 106 70.8
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 6.4e-37 157.9 106 70.8
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 8.4e-37 157.5 97 75.3
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 8.4e-37 157.5 96 75.0
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.1e-36 157.1 97 73.2
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.4e-36 156.8 108 66.7
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.4e-36 156.8 96 74.0
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.4e-36 156.8 103 69.9
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.4e-36 156.8 103 69.9
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 7.1e-36 154.5 96 76.0
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 7.1e-36 154.5 108 68.5
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 9.3e-36 154.1 96 76.0
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 9.3e-36 154.1 96 71.9
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 9.3e-36 154.1 106 67.9
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 9.3e-36 154.1 97 73.2
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.2e-35 153.7 100 72.0
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 1.2e-35 153.7 96 76.0
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.6e-35 153.3 94 74.5
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.6e-35 153.3 104 69.2
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 2.7e-35 152.5 110 66.4
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.5e-35 152.1 96 69.8
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 4.6e-35 151.8 96 75.0
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 4.6e-35 151.8 116 64.7
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 4.6e-35 151.8 106 67.0
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.3e-34 150.2 103 68.0
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.3e-34 150.2 96 70.8
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 1.3e-34 150.2 104 69.2
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.7e-34 149.8 113 64.6
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.3e-34 149.4 108 63.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 3.0e-34 149.1 107 68.2
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 3.0e-34 149.1 104 65.4
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 3.9e-34 148.7 96 70.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.9e-34 148.7 95 73.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.9e-34 148.7 95 73.7
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 5.1e-34 148.3 94 73.4
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 5.1e-34 148.3 96 70.8
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 1.1e-33 147.1 97 71.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.1e-33 147.1 104 66.3
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.5e-33 146.7 108 67.6
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 2.5e-33 146.0 103 64.1
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 5.6e-33 144.8 109 65.1
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 5.6e-33 144.8 99 68.7
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.3e-32 143.7 99 67.7
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 8.1e-32 141.0 96 68.8
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 1.4e-31 140.2 96 67.7
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.4e-31 139.4 97 68.0
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.1e-31 139.0 93 67.7
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 5.8e-30 134.8 82 73.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.3e-29 133.7 93 66.7
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.7e-29 133.3 91 68.1
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 9.3e-28 127.5 96 63.5
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.2e-27 127.1 100 62.0
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.6e-27 126.7 98 61.2
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.0e-26 124.0 94 63.8
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.0e-26 122.5 109 56.9
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 3.3e-25 119.0 87 67.8
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-23 113.2 79 68.4
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.7e-21 106.7 82 64.6
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.2e-21 106.3 101 55.4
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.2e-21 106.3 101 55.4
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.2e-21 106.3 101 55.4
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.4e-20 103.6 99 52.5
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.0e-19 98.2 98 50.0
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.9e-17 93.2 79 59.5
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 5.3e-15 85.1 57 64.9
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 2.6e-14 82.8 48 77.1
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 4.6e-11 72.0 44 72.7
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 5.1e-10 68.6 44 63.6
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 9.7e-09 64.3 95 40.0
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 4.8e-08 62.0 82 42.7


User provided reference genes

Program Settings