Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p021608 Quercus lobata HOM05D006603 ORTHO05D007786 6.1e-42 173.7 87 100.0
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 5.1e-12 74.3 52 71.2
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 7.3e-11 70.5 53 64.2
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 7.3e-11 70.5 51 66.7
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 9.6e-11 70.1 53 64.2
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 1.6e-10 69.3 52 61.5
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 2.1e-10 68.9 44 75.0
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 2.1e-10 68.9 52 67.3
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 6.2e-10 67.4 52 61.5
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 1.1e-09 66.6 52 59.6
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 1.1e-09 66.6 53 64.2
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 1.8e-09 65.9 48 64.6
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 5.3e-09 64.3 44 70.5
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 6.9e-09 63.9 48 64.6
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 1.2e-08 63.2 52 51.9
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 1.2e-08 63.2 52 55.8
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 1.5e-08 62.8 43 74.4
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 2.0e-08 62.4 53 60.4
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 2.6e-08 62.0 52 53.8
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 2.6e-08 62.0 53 56.6
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 3.4e-08 61.6 52 63.5
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 7.6e-08 60.5 51 62.7
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 7.6e-08 60.5 53 58.5
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 7.6e-08 60.5 54 57.4
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 9.9e-08 60.1 55 58.2
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 1.3e-07 59.7 49 63.3
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 1.7e-07 59.3 52 59.6
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 2.2e-07 58.9 46 65.2
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.2e-07 58.9 46 65.2
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.2e-07 58.9 46 65.2
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 3.8e-07 58.2 46 56.5
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 4.9e-07 57.8 53 62.3
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 8.4e-07 57.0 48 62.5
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 1.4e-06 56.2 52 55.8
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 1.4e-06 56.2 52 55.8
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 1.9e-06 55.8 52 53.8
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 1.9e-06 55.8 46 58.7
Sabra16G0316500 Salix brachista HOM05D006603 ORTHO05D007786 2.4e-06 55.5 71 45.1
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 3.2e-06 55.1 53 56.6
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 3.2e-06 55.1 53 52.8
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 3.2e-06 55.1 46 63.0
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 4.2e-06 54.7 52 53.8
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 4.2e-06 54.7 42 64.3
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 5.4e-06 54.3 53 52.8
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 5.4e-06 54.3 53 52.8


User provided reference genes

Program Settings