Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 2.2e-85 318.9 162 100.0
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.0e-74 283.5 160 86.9
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 3.0e-74 282.0 157 86.6
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 1.1e-73 280.0 162 84.0
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 2.5e-73 278.9 160 85.6
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 2.5e-73 278.9 160 85.6
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 1.6e-72 276.2 160 85.0
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 4.8e-72 274.6 160 84.4
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 6.2e-72 274.2 166 81.9
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 6.2e-72 274.2 161 84.5
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 8.1e-72 273.9 159 85.5
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 1.8e-71 272.7 161 83.2
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 2.4e-71 272.3 161 82.6
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 4.0e-71 271.6 158 82.9
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 5.3e-71 271.2 158 83.5
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 5.3e-71 271.2 160 81.9
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 9.0e-71 270.4 160 81.9
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 1.2e-70 270.0 161 82.6
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 2.0e-70 269.2 160 80.6
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 3.4e-70 268.5 164 81.7
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 1.3e-69 266.5 160 82.5
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 1.7e-69 266.2 160 79.4
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 3.8e-69 265.0 160 81.9
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 3.8e-69 265.0 162 80.9
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 8.4e-69 263.8 160 80.0
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 1.9e-68 262.7 162 79.0
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 4.2e-68 261.5 151 83.4
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 4.2e-68 261.5 158 81.6
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 4.2e-68 261.5 150 86.0
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 7.1e-68 260.8 160 79.4
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 7.1e-68 260.8 162 79.6
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 7.1e-68 260.8 160 78.8
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 7.1e-68 260.8 160 78.8
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 1.6e-67 259.6 158 77.8
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 2.7e-67 258.8 158 78.5
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 2.7e-67 258.8 158 77.8
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 3.5e-67 258.5 164 78.0
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 6.0e-67 257.7 158 78.5
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 6.0e-67 257.7 162 78.4
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.0e-66 256.9 155 81.3
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 2.3e-66 255.8 158 76.6
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 2.3e-66 255.8 158 79.7
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 3.0e-66 255.4 160 80.0
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 3.9e-66 255.0 158 81.0
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.1e-65 253.4 159 79.2
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 1.1e-65 253.4 155 80.6
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 1.9e-65 252.7 158 79.1
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 1.9e-65 252.7 158 79.1
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 2.5e-65 252.3 159 78.6
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.5e-65 252.3 159 78.6
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 4.3e-65 251.5 152 78.3
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 4.3e-65 251.5 158 78.5
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 5.6e-65 251.1 152 80.9
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 7.4e-65 250.8 157 77.1
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 7.4e-65 250.8 156 78.2
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 7.4e-65 250.8 161 75.2
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 1.3e-64 250.0 152 80.3
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 1.3e-64 250.0 161 73.9
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 1.6e-64 249.6 158 79.1
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 1.6e-64 249.6 158 79.1
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 1.6e-64 249.6 158 77.2
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 1.6e-64 249.6 152 80.9
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 2.1e-64 249.2 153 81.0
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 2.1e-64 249.2 158 75.9
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 2.1e-64 249.2 157 76.4
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 2.1e-64 249.2 157 76.4
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 2.1e-64 249.2 157 77.1
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 2.8e-64 248.8 154 77.9
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 2.8e-64 248.8 157 76.4
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 2.8e-64 248.8 158 77.8
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 3.7e-64 248.4 158 78.5
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 4.8e-64 248.1 158 77.8
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 4.8e-64 248.1 158 78.5
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 6.2e-64 247.7 157 78.3
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 8.1e-64 247.3 149 79.9
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 1.8e-63 246.1 158 75.9
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 2.4e-63 245.7 158 75.9
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 3.1e-63 245.4 159 74.2
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 6.9e-63 244.2 162 72.8
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 9.0e-63 243.8 158 75.3
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 9.0e-63 243.8 149 79.9
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 5.8e-62 241.1 152 78.9
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 2.9e-61 238.8 154 74.7
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 4.9e-61 238.0 158 74.1
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 8.4e-61 237.3 157 70.1
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 1.1e-60 236.9 158 73.4
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 1.4e-60 236.5 180 67.8
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 4.2e-60 235.0 144 79.2
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 4.2e-60 235.0 158 73.4
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 4.2e-60 235.0 148 77.7
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.2e-59 233.4 159 74.2
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 1.2e-59 233.4 157 70.7
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 2.3e-58 229.2 194 63.4
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 5.7e-57 224.6 154 72.1
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 6.3e-56 221.1 170 67.1
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 7.6e-54 214.2 181 60.8
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 5.7e-49 198.0 158 58.9
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 2.0e-46 189.5 114 82.5
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 2.0e-46 189.5 118 79.7
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 1.2e-43 180.3 93 91.4
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.0e-42 177.2 148 57.4
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 1.8e-42 176.4 93 87.1
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 1.5e-41 173.3 149 60.4
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 2.5e-41 172.6 265 42.6
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 9.7e-41 170.6 110 76.4
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 5.3e-39 164.9 158 51.9
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 5.0e-37 158.3 158 57.6
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 6.5e-37 157.9 159 50.3
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 2.3e-34 149.4 153 51.0
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 3.0e-34 149.1 154 48.1
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 1.2e-30 137.1 88 79.5
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 4.0e-26 122.1 140 42.9
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.1e-19 99.8 76 65.8
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 8.8e-18 94.4 63 71.4
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 6.3e-16 88.2 64 67.2
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 9.1e-15 84.3 88 50.0
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 2.0e-14 83.2 49 75.5
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 4.5e-14 82.0 55 72.7
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 1.3e-13 80.5 45 82.2
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 9.5e-12 74.3 137 33.6
C05p47480 Brassica napus HOM05D006656 ORTHO05D008208 1.4e-10 70.5 37 89.2
C03p47720 Brassica napus HOM05D006656 ORTHO05D008208 8.8e-10 67.8 37 83.8
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 6.3e-08 61.6 52 63.5


User provided reference genes

Program Settings