Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 3.2e-81 305.1 158 100.0
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 1.1e-49 200.3 161 72.7
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.2e-48 196.8 145 75.2
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 2.7e-48 195.7 161 71.4
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 6.1e-48 194.5 161 68.9
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.0e-47 193.7 118 86.4
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.8e-47 193.0 162 70.4
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 5.7e-46 188.0 131 79.4
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 7.5e-46 187.6 160 70.0
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 7.5e-46 187.6 130 78.5
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 9.8e-46 187.2 159 72.3
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.3e-45 186.8 156 71.2
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 1.7e-45 186.4 130 77.7
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.2e-45 186.0 151 68.9
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 2.8e-45 185.7 130 77.7
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 3.7e-45 185.3 140 74.3
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 3.7e-45 185.3 121 81.8
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.8e-45 184.9 130 77.7
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 4.8e-45 184.9 138 73.9
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.1e-44 183.7 159 66.0
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.1e-44 183.7 138 72.5
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 3.1e-44 182.2 118 82.2
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.1e-44 182.2 160 66.2
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 4.1e-44 181.8 124 77.4
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 4.1e-44 181.8 163 67.5
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 5.4e-44 181.4 138 72.5
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 5.4e-44 181.4 160 66.2
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 7.0e-44 181.0 141 72.3
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 9.1e-44 180.6 129 79.8
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 1.2e-43 180.3 140 70.7
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.2e-43 180.3 140 71.4
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.2e-43 180.3 134 77.6
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.2e-43 180.3 134 77.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.2e-43 180.3 125 79.2
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 1.2e-43 180.3 161 66.5
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.6e-43 179.9 159 65.4
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 1.6e-43 179.9 131 73.3
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.6e-43 179.9 126 76.2
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 2.0e-43 179.5 140 72.1
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 2.0e-43 179.5 160 66.2
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 2.7e-43 179.1 140 72.1
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 2.7e-43 179.1 129 79.1
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 2.7e-43 179.1 163 65.6
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.7e-43 179.1 142 73.2
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 3.5e-43 178.7 116 81.9
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.5e-43 178.7 153 71.2
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 3.5e-43 178.7 162 63.6
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 3.5e-43 178.7 142 72.5
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 4.5e-43 178.3 158 65.8
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 4.5e-43 178.3 165 66.1
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 5.9e-43 177.9 160 64.4
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 7.7e-43 177.6 138 74.6
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.3e-42 176.8 162 65.4
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 1.7e-42 176.4 140 71.4
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.7e-42 176.4 127 75.6
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.2e-42 176.0 160 65.0
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.2e-42 176.0 153 70.6
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.2e-42 176.0 153 70.6
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 2.2e-42 176.0 158 63.9
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 2.2e-42 176.0 127 75.6
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.9e-42 175.6 124 75.0
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.9e-42 175.6 124 75.0
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 2.9e-42 175.6 159 66.7
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 2.9e-42 175.6 117 78.6
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 3.8e-42 175.3 117 79.5
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 5.0e-42 174.9 160 66.9
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 5.0e-42 174.9 138 73.9
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 5.0e-42 174.9 127 76.4
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 5.0e-42 174.9 126 77.8
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 6.5e-42 174.5 130 74.6
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.1e-41 173.7 162 65.4
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.1e-41 173.7 141 68.8
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.5e-41 173.3 130 73.8
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 1.5e-41 173.3 130 73.1
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 1.9e-41 172.9 132 72.7
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.9e-41 172.9 117 81.2
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.5e-41 172.6 116 78.4
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 3.2e-41 172.2 162 63.6
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 3.2e-41 172.2 122 77.9
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 5.5e-41 171.4 134 70.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 9.5e-41 170.6 123 75.6
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 1.2e-40 170.2 119 74.8
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.2e-40 170.2 123 75.6
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 1.2e-40 170.2 156 60.9
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 2.7e-40 169.1 120 77.5
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 3.6e-40 168.7 155 64.5
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 3.6e-40 168.7 116 76.7
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 3.6e-40 168.7 116 76.7
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 3.6e-40 168.7 117 76.1
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 4.7e-40 168.3 155 63.2
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 6.1e-40 167.9 129 75.2
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.4e-39 166.8 125 72.8
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 1.8e-39 166.4 140 68.6
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.8e-39 166.4 112 77.7
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.0e-39 165.6 151 62.3
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 5.2e-39 164.9 146 63.7
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 5.2e-39 164.9 159 64.2
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.6e-38 162.5 132 69.7
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 3.4e-38 162.2 159 60.4
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 2.8e-37 159.1 122 71.3
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 6.3e-37 157.9 151 61.6
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 8.3e-37 157.5 165 57.0
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 5.4e-36 154.8 121 68.6
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 7.0e-36 154.5 126 69.8
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 7.0e-36 154.5 127 65.4
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 1.2e-35 153.7 119 68.9
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 1.6e-35 153.3 131 67.2
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 4.5e-35 151.8 77 94.8
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.3e-34 150.2 158 57.0
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 1.7e-34 149.8 132 63.6
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 2.3e-34 149.4 165 53.3
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 3.8e-34 148.7 77 93.5
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 4.7e-32 141.7 82 84.1
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.0e-31 140.6 96 76.0
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 2.0e-30 136.3 75 86.7
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 5.7e-30 134.8 123 62.6
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.5e-25 119.4 123 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.2e-24 117.1 130 51.5
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 3.6e-24 115.5 130 56.2
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 6.2e-24 114.8 125 52.0
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.4e-23 113.6 102 66.7
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 2.3e-23 112.8 98 62.2
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 4.9e-21 105.1 75 65.3
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.4e-20 102.8 78 66.7
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 1.6e-16 90.1 129 45.0
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 2.1e-16 89.7 77 55.8
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 2.1e-08 63.2 35 91.4
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 1.5e-06 57.0 72 41.7


User provided reference genes

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