Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p015445 Quercus lobata HOM05D000030 ORTHO05D030032 3.1e-81 305.1 152 100.0
QL02p050212 Quercus lobata HOM05D000030 ORTHO05D000031 1.2e-61 240.0 186 67.7
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 1.5e-59 233.0 186 67.2
QL08p037122 Quercus lobata HOM05D000177 ORTHO05D030032 4.6e-53 211.5 122 83.6
QL10p023376 Quercus lobata HOM05D000030 ORTHO05D000031 1.0e-28 130.6 140 55.7
Rhsim06G0108000 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.2e-28 128.3 182 42.3
Rhsim04G0248700 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.4e-27 125.2 182 41.8
Rhsim09G0046200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-23 113.2 150 42.7
Eucgr.C01635 Eucalyptus grandis HOM05D000030 ORTHO05D000009 6.3e-18 94.7 167 34.7
Eucgr.C01493 Eucalyptus grandis HOM05D000030 ORTHO05D000009 1.6e-16 90.1 168 35.7
Eucgr.B02668 Eucalyptus grandis HOM05D000030 ORTHO05D000009 3.3e-14 82.4 124 37.9
Eucgr.E01324 Eucalyptus grandis HOM05D000030 ORTHO05D000009 1.8e-12 76.6 182 30.2
Hma1.2p1_1484F.1_g286330 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-11 73.9 170 30.0
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-11 73.6 179 26.3
Rhsim01G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-11 73.2 177 27.7
QL03p065377 Quercus lobata HOM05D000030 ORTHO05D000009 7.5e-11 71.2 175 26.9
PGR044G2094 Punica granatum HOM05D000030 ORTHO05D000009 1.3e-10 70.5 180 28.9
PGR083G0765 Punica granatum HOM05D000030 ORTHO05D000009 1.3e-10 70.5 180 28.9
PGR102G1721 Punica granatum HOM05D000030 ORTHO05D000009 1.3e-10 70.5 180 28.9
QL03p018711 Quercus lobata HOM05D000030 ORTHO05D000009 1.3e-10 70.5 173 26.6
Dinv03813 Davidia involucrata HOM05D000030 ORTHO05D000031 1.7e-10 70.1 168 30.4
Rhsim10G0081100 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-10 70.1 151 30.5
Ah.09g227960 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.2e-10 69.7 168 32.7
Rhsim03G0020200 Rhododendron simsii HOM05D000030 ORTHO05D000031 2.9e-10 69.3 151 30.5
Rhsim04G0181200 Rhododendron simsii HOM05D000030 ORTHO05D000031 2.9e-10 69.3 151 30.5
Rhsim09G0092700 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-10 69.3 151 29.8
Cc00_g34900 Coffea canephora HOM05D000030 ORTHO05D000009 8.3e-10 67.8 173 29.5
PGR031G0853 Punica granatum HOM05D000030 ORTHO05D000009 1.1e-09 67.4 175 27.4
Nn1g06979 Nelumbo nucifera HOM05D000030 ORTHO05D000031 1.4e-09 67.0 154 28.6
Nitab4.5_0005580g0030 Nicotiana tabacum HOM05D000030 ORTHO05D000031 1.8e-09 66.6 179 28.5
Ah.13g066340 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.4e-09 66.2 153 32.0
Aqoxy7G02382 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 3.2e-09 65.9 164 23.8
HanXRQChr14g0433801 Helianthus annuus HOM05D000030 ORTHO05D000031 3.2e-09 65.9 183 28.4
PGR119G1248 Punica granatum HOM05D000030 ORTHO05D000009 3.2e-09 65.9 175 28.0
Sopen01g019310 Solanum pennellii HOM05D000030 ORTHO05D000031 3.2e-09 65.9 108 36.1
PGR083G1738 Punica granatum HOM05D000030 ORTHO05D000031 4.1e-09 65.5 127 31.5
Rhsim03G0206300 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.1e-09 65.5 102 35.3
Ah.09g224660 Amaranthus hybridus HOM05D000030 ORTHO05D000009 7.0e-09 64.7 153 32.0
HanXRQChr10g0289591 Helianthus annuus HOM05D000030 ORTHO05D000009 7.0e-09 64.7 178 31.5
Rhsim05G0096700 Rhododendron simsii HOM05D002753 ORTHO05D003097 9.2e-09 64.3 102 32.4
SHI07177 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-08 63.9 169 27.8
SHI12385 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-08 63.9 169 27.8
SHI20466 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-08 63.9 169 27.8
Peaxi162Scf00580g00071 Petunia axillaris HOM05D000030 ORTHO05D000009 1.6e-08 63.5 103 35.9
ECA246G1631 Erigeron canadensis HOM05D000030 ORTHO05D000031 2.7e-08 62.8 166 32.5
HanXRQChr03g0074851 Helianthus annuus HOM05D000030 ORTHO05D000009 2.7e-08 62.8 105 32.4
QL02p074905 Quercus lobata HOM05D000030 ORTHO05D000009 2.7e-08 62.8 150 26.7
Rhsim09G0036100 Rhododendron simsii HOM05D000447 ORTHO05D000009 2.7e-08 62.8 127 28.3
EL10Ac7g17883 Beta vulgaris HOM05D000030 ORTHO05D000031 7.8e-08 61.2 165 30.3
RcHm_v2.0_Chr1g0330231 Rosa chinensis HOM05D000030 ORTHO05D000031 7.8e-08 61.2 177 29.9
Aqoxy1G03509 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.3e-07 60.5 172 25.0
Aqoxy7G02841 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.3e-07 60.5 172 25.0
Aqoxy4G00960 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 1.7e-07 60.1 169 23.1
PSO832G1791 Papaver somniferum HOM05D000030 ORTHO05D000009 1.7e-07 60.1 61 41.0
TPR.G2240 Trifolium pratense HOM05D000030 ORTHO05D000009 1.7e-07 60.1 187 26.2
Nitab4.5_0000016g0270 Nicotiana tabacum HOM05D000030 ORTHO05D000031 2.3e-07 59.7 123 31.7
Ah.06g189410 Amaranthus hybridus HOM05D000030 ORTHO05D000031 3.9e-07 58.9 152 32.9
MD10G1273100 Malus domestica HOM05D000030 ORTHO05D000009 3.9e-07 58.9 114 30.7
Aqoxy5G03111 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 5.0e-07 58.5 164 22.6
SHI45808 Sapria himalayana HOM05D000035 ORTHO05D000031 5.0e-07 58.5 141 34.8
Thecc.06G002000 Theobroma cacao HOM05D000030 ORTHO05D000009 5.0e-07 58.5 167 24.6
Atru.chr1.2377 Acer truncatum HOM05D000030 ORTHO05D000031 8.6e-07 57.8 179 25.7
Aqoxy2G02219 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 8.6e-07 57.8 116 27.6
CAN.G574.8 Capsicum annuum HOM05D000570 ORTHO05D001174 8.6e-07 57.8 51 52.9
Lj5g0027784 Lotus japonicus HOM05D000030 ORTHO05D000009 1.1e-06 57.4 165 26.1
RcHm_v2.0_Chr1g0315421 Rosa chinensis HOM05D000030 ORTHO05D000009 1.1e-06 57.4 158 29.7
PGR064G0018 Punica granatum HOM05D000030 ORTHO05D000009 1.5e-06 57.0 107 30.8
Ah.01g015590 Amaranthus hybridus HOM05D000030 ORTHO05D000031 1.9e-06 56.6 152 27.6
Lj3g0017786 Lotus japonicus HOM05D000030 ORTHO05D000009 1.9e-06 56.6 177 26.0
SHI48363 Sapria himalayana HOM05D000035 ORTHO05D000031 1.9e-06 56.6 78 41.0
PGR119G1072 Punica granatum HOM05D000030 ORTHO05D000009 2.5e-06 56.2 107 29.9
Hund25690 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.5e-06 56.2 177 24.9
Aqoxy3G01973 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 3.3e-06 55.8 121 26.4
HanXRQChr13g0407041 Helianthus annuus HOM05D000030 ORTHO05D000009 3.3e-06 55.8 107 33.6
Hma1.2p1_0255F.1_g103260 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.3e-06 55.8 150 26.0
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.3e-06 55.8 150 25.3
SHI43251 Sapria himalayana HOM05D000035 ORTHO05D000031 4.3e-06 55.5 76 44.7
Hund11638 Selenicereus undatus HOM05D000030 ORTHO05D000031 4.3e-06 55.5 177 24.3
Ca_14817_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 5.6e-06 55.1 133 30.8
MD01G1147100 Malus domestica HOM05D000030 ORTHO05D000031 5.6e-06 55.1 87 33.3
SHI14906 Sapria himalayana HOM05D000030 ORTHO05D000009 5.6e-06 55.1 155 27.1
Hund12458 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.6e-06 55.1 178 24.7
PGR142G3856 Punica granatum HOM05D000030 ORTHO05D000031 7.3e-06 54.7 55 43.6
Rhsim10G0144000 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.5e-06 54.3 101 32.7


User provided reference genes

Program Settings