Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p015203 Quercus lobata HOM05D005370 ORTHO05D006659 1.4e-30 135.6 68 100.0
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.8e-10 68.2 34 100.0
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 1.6e-08 62.4 34 88.2
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.0e-08 62.0 34 85.3
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 3.5e-08 61.2 31 96.8
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 3.5e-08 61.2 34 85.3
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 3.5e-08 61.2 34 85.3
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 3.5e-08 61.2 34 85.3
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 4.5e-08 60.8 34 85.3
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 4.5e-08 60.8 33 87.9
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 7.7e-08 60.1 34 82.4
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 7.7e-08 60.1 31 93.5
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 7.7e-08 60.1 34 79.4
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.0e-07 59.7 30 96.7
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 1.0e-07 59.7 30 96.7
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.0e-07 59.7 30 96.7
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 1.0e-07 59.7 34 82.4
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.3e-07 59.3 34 85.3
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 1.7e-07 58.9 34 79.4
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 1.7e-07 58.9 34 82.4
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.7e-07 58.9 34 85.3
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 2.3e-07 58.5 34 79.4
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 2.3e-07 58.5 34 79.4
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 2.3e-07 58.5 34 82.4
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 2.9e-07 58.2 32 87.5
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.9e-07 58.2 34 79.4
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 3.8e-07 57.8 33 84.8
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 3.8e-07 57.8 31 90.3
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 3.8e-07 57.8 35 80.0
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.0e-07 57.4 31 87.1
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.0e-07 57.4 31 87.1
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 6.6e-07 57.0 32 81.2
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 6.6e-07 57.0 34 79.4
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 6.6e-07 57.0 31 87.1
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 6.6e-07 57.0 34 79.4
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 8.6e-07 56.6 31 83.9
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.1e-06 56.2 34 76.5
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.9e-06 55.5 30 86.7
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 2.5e-06 55.1 34 76.5
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 3.3e-06 54.7 34 70.6
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 3.3e-06 54.7 33 78.8
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 4.2e-06 54.3 33 75.8
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 4.2e-06 54.3 31 83.9
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 4.2e-06 54.3 32 81.2
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 4.2e-06 54.3 34 73.5
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 4.2e-06 54.3 34 73.5
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 5.5e-06 53.9 31 80.6
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 7.2e-06 53.5 45 62.2
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 7.2e-06 53.5 30 83.3
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 9.5e-06 53.1 32 78.1
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 9.5e-06 53.1 34 73.5


User provided reference genes

Program Settings