Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.9e-127 459.1 225 100.0
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 4.0e-77 292.0 183 77.6
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 3.4e-76 288.9 222 67.1
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 7.6e-76 287.7 221 67.9
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 7.6e-76 287.7 222 66.7
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 1.3e-75 287.0 220 65.9
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.2e-75 286.2 222 66.7
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 3.7e-75 285.4 220 66.4
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 4.9e-75 285.0 227 66.5
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.9e-74 283.1 216 67.6
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 4.1e-74 282.0 226 64.2
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 5.4e-74 281.6 228 64.5
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.2e-73 280.4 221 64.7
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.6e-73 280.0 214 66.4
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 7.8e-73 277.7 227 62.6
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 7.8e-73 277.7 225 64.4
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 2.5e-71 272.7 225 61.8
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 7.3e-71 271.2 220 63.2
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 9.6e-71 270.8 212 63.7
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 9.6e-71 270.8 227 63.4
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 1.6e-70 270.0 227 63.9
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.6e-70 270.0 227 63.9
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.1e-70 269.6 225 62.7
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 6.2e-70 268.1 219 63.5
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 6.2e-70 268.1 229 59.4
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 6.2e-70 268.1 222 62.2
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.4e-69 266.9 225 60.4
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 2.4e-69 266.2 217 63.6
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 2.0e-68 263.1 229 63.3
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 2.6e-68 262.7 242 57.9
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 5.8e-68 261.5 233 58.8
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 5.8e-68 261.5 233 58.8
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 1.3e-67 260.4 229 61.6
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 2.9e-67 259.2 218 61.9
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.4e-66 256.9 220 57.3
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.4e-66 256.9 214 60.3
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.4e-66 256.9 221 59.7
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 2.4e-66 256.1 223 59.2
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 2.4e-66 256.1 221 60.2
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 7.1e-66 254.6 227 59.0
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 7.1e-66 254.6 218 59.2
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 7.1e-66 254.6 222 59.0
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 9.3e-66 254.2 213 58.2
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 9.3e-66 254.2 215 61.4
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.2e-65 253.8 218 59.2
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 1.6e-65 253.4 227 58.6
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.6e-65 253.4 227 59.0
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 2.1e-65 253.1 224 58.9
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 2.7e-65 252.7 227 58.6
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 2.7e-65 252.7 227 58.6
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 2.7e-65 252.7 227 58.6
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 3.5e-65 252.3 219 58.9
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 3.5e-65 252.3 218 59.6
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 4.6e-65 251.9 220 58.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 1.0e-64 250.8 163 71.2
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.0e-64 250.8 221 57.9
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 1.7e-64 250.0 224 57.6
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.7e-64 250.0 230 58.7
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 2.3e-64 249.6 200 63.5
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 2.3e-64 249.6 218 58.7
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 3.0e-64 249.2 163 71.8
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.5e-63 246.1 215 59.1
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 3.3e-63 245.7 226 57.1
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 1.6e-62 243.4 163 71.8
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 2.8e-62 242.7 163 70.6
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 3.6e-62 242.3 218 56.9
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 6.2e-62 241.5 218 57.8
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 6.2e-62 241.5 213 58.2
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 8.1e-62 241.1 186 62.4
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 1.4e-61 240.4 192 60.9
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.8e-61 240.0 218 57.3
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 2.4e-61 239.6 230 56.1
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 4.0e-61 238.8 218 57.3
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 5.3e-61 238.4 212 57.1
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 5.3e-61 238.4 227 55.5
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 6.9e-61 238.0 226 57.5
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 4.4e-60 235.3 174 66.1
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 4.9e-59 231.9 157 66.9
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 3.3e-55 219.2 223 52.0
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.6e-54 216.9 327 43.1
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 4.0e-53 212.2 205 54.6
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.2e-52 210.7 171 57.3
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 7.6e-52 208.0 222 50.0
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 2.9e-51 206.1 138 68.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 1.6e-49 200.3 219 47.5
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 9.6e-47 191.0 227 48.9
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.1e-46 189.9 125 71.2
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.6e-41 173.7 101 78.2
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 3.0e-40 169.5 101 78.2
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 3.7e-38 162.5 152 52.6
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 8.2e-38 161.4 153 54.9
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 4.1e-37 159.1 227 45.4
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 7.6e-36 154.8 129 61.2
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 1.3e-35 154.1 103 70.9
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 1.8e-32 143.7 221 45.2
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 1.6e-30 137.1 147 50.3
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.8e-21 107.1 74 68.9
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 1.2e-20 104.4 122 45.1
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 3.4e-20 102.8 131 45.0
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.0e-19 101.3 118 46.6
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 5.0e-19 99.0 67 64.2
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 1.4e-16 90.9 122 41.0
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 8.2e-14 81.6 123 42.3
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.9e-10 70.5 41 73.2


User provided reference genes

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