Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 2.2e-35 151.8 76 100.0
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 2.3e-32 141.7 76 93.4
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.0e-32 140.6 74 93.2
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.0e-32 140.6 74 93.2
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 5.0e-32 140.6 74 93.2
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 6.6e-32 140.2 74 91.9
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 6.6e-32 140.2 74 91.9
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 2.5e-31 138.3 76 88.2
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 2.5e-31 138.3 73 90.4
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 2.5e-31 138.3 76 88.2
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 3.3e-31 137.9 76 88.2
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 3.3e-31 137.9 76 85.5
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 5.6e-31 137.1 74 90.5
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 7.3e-31 136.7 76 84.2
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 9.5e-31 136.3 76 84.2
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 2.1e-30 135.2 75 88.0
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 3.6e-30 134.4 76 86.8
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 3.6e-30 134.4 76 86.8
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.6e-30 134.4 75 84.0
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 4.7e-30 134.0 76 86.8
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 4.7e-30 134.0 74 87.8
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 6.2e-30 133.7 74 85.1
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 6.2e-30 133.7 76 84.2
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 8.0e-30 133.3 76 85.5
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 8.0e-30 133.3 74 86.5
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 8.0e-30 133.3 74 87.8
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 8.0e-30 133.3 76 84.2
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 8.0e-30 133.3 74 85.1
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.1e-29 132.9 74 85.1
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.1e-29 132.9 74 82.4
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.4e-29 132.5 75 85.3
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 1.4e-29 132.5 74 87.8
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.8e-29 132.1 74 85.1
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 2.3e-29 131.7 76 85.5
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 3.1e-29 131.3 76 82.9
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 3.1e-29 131.3 74 85.1
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 5.2e-29 130.6 76 81.6
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 5.2e-29 130.6 74 83.8
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 5.2e-29 130.6 76 82.9
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 6.8e-29 130.2 75 81.3
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.2e-28 129.4 76 80.3
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 1.5e-28 129.0 75 82.7
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.5e-28 129.0 74 85.1
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 2.0e-28 128.6 75 82.7
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 2.0e-28 128.6 74 85.1
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 2.0e-28 128.6 76 81.6
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.6e-28 128.3 75 82.7
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.6e-28 128.3 75 84.0
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 2.6e-28 128.3 75 84.0
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 4.4e-28 127.5 75 82.7
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 5.8e-28 127.1 74 81.1
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.8e-28 127.1 75 81.3
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.8e-28 127.1 75 81.3
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 5.8e-28 127.1 76 78.9
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 5.8e-28 127.1 75 82.7
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 5.8e-28 127.1 75 82.7
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 5.8e-28 127.1 75 82.7
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 7.5e-28 126.7 74 81.1
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 9.8e-28 126.3 74 81.1
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 9.8e-28 126.3 72 83.3
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 1.7e-27 125.6 75 81.3
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 1.7e-27 125.6 75 81.3
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 1.7e-27 125.6 71 83.1
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 2.9e-27 124.8 71 84.5
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 3.7e-27 124.4 74 79.7
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 4.9e-27 124.0 74 79.7
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 6.4e-27 123.6 74 78.4
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.1e-26 122.9 75 78.7
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 1.1e-26 122.9 76 78.9
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 1.9e-26 122.1 74 81.1
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 77.3
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 77.3
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.4e-26 121.7 74 77.0
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 4.1e-26 120.9 76 77.6
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 7.0e-26 120.2 72 80.6
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 7.0e-26 120.2 74 81.1
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 7.0e-26 120.2 74 79.7
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 9.2e-26 119.8 74 79.7
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 9.2e-26 119.8 74 78.4
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 1.6e-25 119.0 75 81.3
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 2.0e-25 118.6 75 72.0
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 3.5e-25 117.9 66 87.9
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 4.6e-25 117.5 75 76.0
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 1.3e-24 115.9 72 80.6
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 1.7e-24 115.5 72 79.2
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 2.3e-24 115.2 75 72.0
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 5.0e-24 114.0 76 72.4
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 5.0e-24 114.0 72 76.4
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 5.0e-24 114.0 72 76.4
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 5.0e-24 114.0 75 74.7
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 6.6e-24 113.6 75 74.7
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 6.6e-24 113.6 75 74.7
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 1.9e-23 112.1 104 58.7
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 1.9e-23 112.1 75 74.7
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 5.6e-23 110.5 67 79.1
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.3e-23 110.2 76 71.1
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 9.5e-23 109.8 72 73.6
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 1.6e-22 109.0 75 70.7
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 2.8e-22 108.2 72 72.2
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 6.2e-22 107.1 72 70.8
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 8.1e-22 106.7 75 70.7
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 1.1e-21 106.3 72 72.2
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 4.0e-21 104.4 76 63.2
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 5.2e-21 104.0 72 68.1
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 4.4e-20 100.9 116 50.0
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 9.9e-20 99.8 72 68.1
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.4e-18 95.9 66 71.2
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 2.4e-18 95.1 68 61.8
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 2.5e-15 85.1 68 54.4
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 1.8e-13 79.0 46 82.6
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 8.9e-13 76.6 57 64.9
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 2.6e-12 75.1 43 83.7
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 7.6e-12 73.6 62 54.8
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 1.3e-11 72.8 67 56.7
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 3.8e-11 71.2 43 79.1
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 8.4e-11 70.1 46 69.6
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 1.4e-10 69.3 43 81.4
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 1.0e-08 63.2 34 85.3
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 3.0e-08 61.6 66 45.5
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 8.7e-08 60.1 34 79.4
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 4.3e-07 57.8 41 65.9
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 9.6e-07 56.6 35 71.4
CsaV3_2G013260 Cucumis sativus L. HOM05D006636 ORTHO05D008266 4.7e-06 54.3 29 86.2


User provided reference genes

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