Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 2.2e-55 218.8 114 100.0
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 1.6e-45 186.0 114 80.7
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 6.0e-45 184.1 114 78.1
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 5.0e-44 181.0 114 78.1
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 5.0e-44 181.0 114 77.2
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 1.5e-43 179.5 112 77.7
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 3.3e-43 178.3 114 78.1
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 1.2e-42 176.4 114 75.4
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 2.8e-42 175.3 114 76.3
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 4.7e-42 174.5 112 75.9
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 8.1e-42 173.7 114 72.8
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 1.1e-41 173.3 114 74.6
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.4e-41 172.9 114 72.8
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.4e-41 172.9 114 77.2
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.4e-41 172.9 114 73.7
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.8e-41 172.6 114 77.2
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 4.0e-41 171.4 114 73.7
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 6.8e-41 170.6 114 75.4
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.2e-40 169.9 114 70.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.5e-40 169.5 114 76.3
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 2.6e-40 168.7 114 76.3
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 3.4e-40 168.3 113 74.3
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 5.8e-40 167.5 114 71.1
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 5.8e-40 167.5 111 78.4
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 5.8e-40 167.5 114 71.9
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 7.5e-40 167.2 114 74.6
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 9.8e-40 166.8 114 71.9
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.3e-39 166.4 114 72.8
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 2.2e-39 165.6 114 74.6
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 2.2e-39 165.6 105 75.2
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 2.9e-39 165.2 113 74.3
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 2.9e-39 165.2 114 71.1
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 2.9e-39 165.2 105 75.2
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 2.9e-39 165.2 114 71.9
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 3.7e-39 164.9 104 81.7
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 3.7e-39 164.9 114 71.1
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 4.9e-39 164.5 114 70.2
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.4e-39 164.1 114 71.1
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.4e-39 164.1 114 71.1
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 6.4e-39 164.1 109 73.4
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 8.3e-39 163.7 114 71.1
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 1.1e-38 163.3 114 70.2
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.1e-38 163.3 107 76.6
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.4e-38 162.9 114 71.1
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.4e-38 162.9 114 70.2
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.4e-38 162.9 109 72.5
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.9e-38 162.5 114 71.1
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.9e-38 162.5 114 69.3
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 3.2e-38 161.8 104 76.9
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 3.2e-38 161.8 114 67.5
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.2e-38 161.8 114 68.4
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 3.2e-38 161.8 114 72.8
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 4.1e-38 161.4 114 71.9
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 7.1e-38 160.6 105 76.2
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 7.1e-38 160.6 114 68.4
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.2e-37 159.8 103 78.6
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 1.2e-37 159.8 114 71.1
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.1e-37 159.1 111 70.3
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 4.6e-37 157.9 114 69.3
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 4.6e-37 157.9 114 70.2
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 4.6e-37 157.9 114 71.9
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 6.0e-37 157.5 104 76.0
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 71.9
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 69.3
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 68.4
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 7.8e-37 157.1 114 66.7
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 7.8e-37 157.1 114 64.9
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.0e-36 156.8 114 70.2
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.0e-36 156.8 103 73.8
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.3e-36 156.4 103 70.9
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 1.3e-36 156.4 103 73.8
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 3.0e-36 155.2 104 76.9
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 6.6e-36 154.1 110 69.1
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.9e-35 152.5 105 70.5
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.9e-35 152.5 108 68.5
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 2.5e-35 152.1 106 74.5
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 5.6e-35 151.0 104 69.2
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 7.3e-35 150.6 104 75.0
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.5e-35 150.2 114 66.7
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 9.5e-35 150.2 139 58.3
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.2e-34 149.8 105 69.5
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 1.2e-34 149.8 114 68.4
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 1.2e-34 149.8 115 65.2
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.6e-34 149.4 105 69.5
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 2.1e-34 149.1 106 70.8
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.1e-34 149.1 104 68.3
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.1e-34 149.1 105 69.5
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 2.1e-34 149.1 114 64.0
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 2.8e-34 148.7 111 65.8
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 2.8e-34 148.7 111 65.8
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 3.6e-34 148.3 110 66.4
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 3.6e-34 148.3 104 73.1
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 3.6e-34 148.3 90 80.0
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 4.7e-34 147.9 105 68.6
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.7e-34 147.9 104 71.2
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 4.7e-34 147.9 110 69.1
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 6.2e-34 147.5 105 68.6
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 6.2e-34 147.5 104 72.1
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 8.1e-34 147.1 115 65.2
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.1e-33 146.7 114 66.7
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.1e-33 146.7 104 67.3
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 1.4e-33 146.4 105 67.6
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 1.4e-33 146.4 114 65.8
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 2.3e-33 145.6 94 74.5
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 3.1e-33 145.2 105 67.6
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 3.1e-33 145.2 113 66.4
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 6.8e-33 144.1 114 64.9
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.2e-32 143.3 102 70.6
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 2.6e-32 142.1 106 67.0
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 3.4e-32 141.7 104 71.2
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.2e-31 139.0 104 64.4
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 8.4e-31 137.1 126 59.5
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.4e-30 136.3 83 78.3
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 1.9e-30 136.0 105 65.7
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 3.2e-30 135.2 98 67.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 4.1e-30 134.8 99 71.7
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 4.1e-30 134.8 99 63.6
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 9.2e-30 133.7 98 61.2
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 1.6e-29 132.9 98 60.2
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 8.6e-28 127.1 82 76.8
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 1.9e-27 125.9 101 64.4
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 1.9e-27 125.9 82 74.4
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 4.3e-27 124.8 104 54.8
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.2e-24 116.7 96 55.2
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.7e-23 112.8 109 56.0
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 1.9e-22 109.4 87 60.9
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.2e-22 108.2 70 77.1
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 6.0e-21 104.4 86 55.8
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 8.7e-20 100.5 67 76.1
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 5.6e-19 97.8 101 46.5
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.1e-18 95.9 62 79.0
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 1.1e-17 93.6 114 53.5
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 5.3e-17 91.3 79 58.2
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.0e-12 75.5 58 62.1
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 1.6e-10 69.7 103 40.8
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 6.2e-10 67.8 81 49.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.8e-09 66.2 52 55.8
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 4.2e-06 55.1 103 31.1


User provided reference genes

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