Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 9.7e-228 793.1 394 100.0
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 9.2e-178 627.1 383 80.9
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 3.9e-176 621.7 354 84.5
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 4.7e-166 588.2 357 81.0
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.3e-159 564.3 361 75.3
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 1.1e-157 560.5 356 73.9
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 1.8e-157 559.7 360 76.4
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.2e-153 547.0 359 73.5
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.6e-153 546.6 358 74.9
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 7.8e-153 544.3 360 74.2
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 7.8e-153 544.3 355 75.5
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.3e-152 543.5 362 73.2
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.3e-152 543.5 356 74.4
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 2.3e-152 542.7 356 74.4
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 8.7e-152 540.8 359 73.5
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 1.9e-151 539.7 356 76.7
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 2.8e-150 535.8 356 75.8
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 2.4e-149 532.7 355 75.5
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.0e-149 531.9 363 71.6
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 9.0e-149 530.8 357 72.0
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 2.0e-148 529.6 386 71.0
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 2.0e-148 529.6 357 72.5
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 7.6e-148 527.7 346 74.0
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 6.4e-147 524.6 355 74.1
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 8.4e-147 524.2 391 68.3
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 1.1e-146 523.9 382 69.6
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 1.4e-146 523.5 356 73.3
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.4e-146 522.7 381 67.5
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 4.6e-145 518.5 385 67.8
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 4.6e-145 518.5 359 70.8
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 7.9e-145 517.7 385 67.3
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 1.1e-143 513.8 360 73.1
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 5.6e-143 511.5 363 68.0
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 7.4e-143 511.1 356 68.3
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 7.4e-143 511.1 356 70.2
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 2.1e-142 509.6 382 68.1
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 2.1e-142 509.6 356 73.3
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.8e-142 509.2 351 70.9
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 3.8e-139 498.8 353 69.7
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 2.4e-138 496.1 360 69.2
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 2.7e-137 492.7 356 67.4
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.8e-136 490.0 387 61.8
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 6.7e-136 488.0 350 66.9
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 1.1e-135 487.3 356 67.1
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 9.6e-135 484.2 357 66.4
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 1.6e-134 483.4 356 64.9
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 6.2e-134 481.5 357 67.2
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 4.0e-133 478.8 358 65.1
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 2.6e-132 476.1 357 64.7
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 5.8e-132 474.9 357 64.4
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 3.8e-131 472.2 387 60.2
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 5.5e-130 468.4 306 72.9
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.1e-127 460.7 360 62.5
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 3.7e-126 455.7 413 59.8
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.8e-125 453.4 349 62.2
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 6.9e-125 451.4 306 71.6
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.2e-124 450.7 349 62.8
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.5e-124 450.3 357 62.5
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 1.3e-123 447.2 308 71.8
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 2.2e-123 446.4 390 57.4
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.8e-123 445.7 359 62.4
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.8e-123 445.7 359 63.0
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.9e-122 443.4 357 61.1
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 1.2e-121 440.7 358 60.1
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 6.1e-121 438.3 359 62.4
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.3e-118 430.6 375 57.6
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 6.3e-118 428.3 339 65.2
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 2.1e-113 413.3 291 70.4
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 7.9e-113 411.4 292 68.2
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 3.1e-109 399.4 384 57.8
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 3.8e-107 392.5 357 56.0
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 3.8e-107 392.5 280 67.5
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 8.2e-94 348.2 357 52.7
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 8.5e-91 338.2 386 48.7
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 8.8e-88 328.2 205 73.7
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.3e-86 324.3 357 47.9
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 1.3e-86 324.3 302 60.6
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 5.4e-85 318.9 409 48.4
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 5.0e-83 312.4 301 50.5
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 8.9e-80 301.6 211 65.9
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 2.0e-79 300.4 330 48.5
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.6e-71 273.5 241 58.1
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 7.5e-71 271.9 383 41.8
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 6.2e-65 252.3 359 40.9
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.1e-64 251.5 190 64.7
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 2.6e-63 246.9 237 51.5
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.7e-51 207.6 187 57.8
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 8.1e-49 198.7 131 74.8
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.1e-40 171.8 129 74.4
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 4.0e-40 169.9 127 61.4
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 3.6e-33 146.7 123 60.2
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.1e-25 120.9 66 87.9
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.4e-21 108.2 87 63.2
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.1e-20 104.4 132 42.4
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.1e-20 104.4 132 42.4
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.3e-17 95.1 66 69.7
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.8e-17 93.2 52 78.8
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 6.9e-16 89.4 59 79.7
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.5e-15 88.2 89 53.9
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 4.5e-15 86.7 97 50.5
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.1e-13 82.0 51 72.5
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.9e-13 81.3 64 67.2
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 5.7e-10 69.7 40 82.5
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 7.4e-10 69.3 40 82.5
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 6.3e-09 66.2 61 55.7


User provided reference genes

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