Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 4.5e-87 324.7 181 100.0
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 3.2e-53 212.2 185 69.7
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 5.4e-48 194.9 188 64.9
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.5e-45 186.8 183 60.7
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 2.0e-42 176.4 199 59.3
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 3.7e-41 172.2 183 61.7
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 1.6e-39 166.8 211 53.6
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 2.0e-39 166.4 177 56.5
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 1.7e-38 163.3 199 55.8
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 3.9e-38 162.2 209 51.7
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 1.5e-37 160.2 200 55.0
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 1.9e-37 159.8 190 56.8
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 2.5e-37 159.5 209 48.3
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 3.3e-37 159.1 209 47.8
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 4.3e-37 158.7 202 54.5
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 4.7e-36 155.2 206 47.6
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.0e-35 154.1 195 53.3
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 1.8e-35 153.3 200 48.0
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 1.5e-34 150.2 208 51.9
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 5.8e-34 148.3 205 51.2
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.7e-33 146.7 194 53.1
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 2.2e-33 146.4 209 46.9
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 6.4e-33 144.8 200 48.5
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.2e-32 142.5 201 48.3
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 1.2e-31 140.6 195 51.3
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 1.6e-31 140.2 193 49.2
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 2.3e-30 136.3 206 50.0
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 3.0e-30 136.0 205 48.3
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 3.9e-30 135.6 202 47.5
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 2.5e-29 132.9 187 49.2
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 2.5e-29 132.9 206 44.2
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 7.3e-29 131.3 208 45.7
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.6e-28 130.2 197 45.2
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 6.2e-28 128.3 203 46.8
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 6.2e-28 128.3 203 46.8
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 8.0e-28 127.9 206 44.7
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.4e-27 127.1 203 46.3
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 2.3e-27 126.3 209 47.8
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.3e-27 126.3 195 47.2
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.1e-27 125.9 180 51.7
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 4.0e-27 125.6 194 40.2
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 3.4e-26 122.5 185 52.4
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 3.4e-26 122.5 206 46.6
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 5.8e-26 121.7 195 46.2
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 5.8e-26 121.7 197 46.2
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.3e-25 120.6 190 46.8
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.7e-25 120.2 189 46.0
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 2.9e-25 119.4 196 41.8
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 3.7e-25 119.0 199 44.2
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 3.7e-25 119.0 199 41.2
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 3.7e-25 119.0 185 47.0
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.1e-24 117.5 190 45.8
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.4e-24 117.1 200 45.0
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.9e-24 116.7 185 46.5
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.9e-24 116.7 181 48.1
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 2.4e-24 116.3 188 45.7
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 5.4e-24 115.2 198 39.9
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 7.0e-24 114.8 188 44.7
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 1.2e-23 114.0 213 42.7
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 2.1e-23 113.2 216 40.7
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 6.0e-23 111.7 192 47.9
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 7.8e-23 111.3 200 45.5
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.0e-22 109.4 181 47.5
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 5.1e-22 108.6 206 41.7
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 5.1e-22 108.6 206 41.7
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 6.6e-22 108.2 195 47.2
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 8.6e-22 107.8 188 43.6
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 1.1e-21 107.5 184 43.5
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 4.3e-21 105.5 173 49.1
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 4.3e-21 105.5 203 42.9
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 4.3e-21 105.5 162 46.9
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 5.6e-21 105.1 102 55.9
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.6e-20 103.6 154 49.4
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 2.8e-20 102.8 206 43.2
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 1.4e-19 100.5 208 43.3
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 1.4e-19 100.5 194 45.9
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 2.3e-19 99.8 173 45.1
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 2.3e-19 99.8 187 41.7
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 3.1e-19 99.4 210 39.5
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 4.0e-19 99.0 201 41.3
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 4.0e-19 99.0 184 41.8
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 4.0e-19 99.0 186 43.0
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 1.2e-18 97.4 190 42.6
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.5e-18 97.1 209 37.8
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.3e-17 94.0 200 38.0
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.9e-17 92.8 189 42.9
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 1.1e-16 90.9 190 41.1
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.9e-16 90.1 180 39.4
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 2.4e-16 89.7 177 44.6
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.2e-15 87.4 73 61.6
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 1.6e-15 87.0 193 40.9
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 2.7e-15 86.3 180 36.7
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 1.3e-14 84.0 185 43.8
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 3.9e-14 82.4 63 68.3
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 6.6e-14 81.6 164 41.5
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 9.6e-13 77.8 123 48.0
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 2.8e-12 76.3 193 38.3
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 2.8e-12 76.3 121 51.2
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 1.2e-10 70.9 158 43.0
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.2e-10 70.9 175 34.3
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 9.9e-10 67.8 143 44.1
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 2.2e-09 66.6 156 35.9
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 1.4e-08 63.9 51 56.9
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 2.4e-08 63.2 156 37.2
ATR0693G346 Amborella trichopoda HOM05D007152 ORTHO05D008912 6.0e-07 58.5 203 38.9
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 1.0e-06 57.8 30 73.3
CDE09G0901 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 8.7e-06 54.7 101 40.6


User provided reference genes

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