Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 8.9e-242 840.1 509 100.0
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 4.2e-159 565.5 524 72.7
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 1.4e-157 560.5 522 73.4
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 7.5e-148 528.1 520 67.5
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 2.6e-140 503.1 523 62.1
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 1.3e-139 500.7 525 62.9
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 4.9e-131 472.2 530 57.7
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 1.9e-130 470.3 551 60.3
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 3.3e-127 459.5 527 55.8
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 2.1e-126 456.8 536 60.4
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 6.2e-126 455.3 526 58.9
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 6.2e-126 455.3 528 59.3
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 1.1e-125 454.5 531 61.4
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.4e-125 453.4 533 58.5
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 5.2e-125 452.2 528 58.1
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 3.8e-123 446.0 535 54.0
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 3.8e-123 446.0 524 62.2
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 6.4e-123 445.3 532 54.3
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 8.4e-123 444.9 538 53.9
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 1.4e-122 444.1 529 58.6
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.9e-122 443.7 535 57.8
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 3.5e-121 439.5 540 58.0
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 7.8e-121 438.3 513 58.7
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.7e-120 434.9 521 58.7
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 2.8e-118 429.9 512 57.0
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 3.6e-118 429.5 545 55.8
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 1.4e-117 427.6 545 57.8
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 2.4e-117 426.8 544 52.4
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 6.4e-115 418.7 512 58.8
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 4.2e-114 416.0 512 58.4
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 4.2e-114 416.0 545 58.3
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 1.6e-113 414.1 533 57.0
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 4.6e-113 412.5 518 56.8
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 1.0e-112 411.4 518 56.6
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.0e-112 411.4 518 56.6
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 5.1e-112 409.1 543 53.0
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 3.3e-111 406.4 473 55.2
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 4.3e-111 406.0 464 63.1
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 2.8e-110 403.3 528 59.8
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 8.1e-110 401.7 550 54.0
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 9.9e-108 394.8 557 53.0
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 2.2e-107 393.7 524 54.2
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 3.8e-107 392.9 527 49.1
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 3.8e-107 392.9 557 52.6
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.4e-106 391.0 470 61.3
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 1.2e-105 387.9 522 55.9
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 2.7e-105 386.7 533 50.1
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 1.0e-104 384.8 536 49.1
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.0e-104 383.3 518 51.0
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 1.1e-103 381.3 535 48.6
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 1.1e-103 381.3 529 52.7
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 3.3e-103 379.8 521 52.6
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 7.4e-103 378.6 534 48.9
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 7.4e-103 378.6 478 52.7
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 1.3e-102 377.9 546 49.3
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 8.1e-102 375.2 532 49.8
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 1.4e-101 374.4 478 53.8
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.4e-101 373.6 547 49.2
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 6.9e-101 372.1 464 53.4
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 1.5e-100 370.9 528 58.0
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 4.5e-100 369.4 477 55.8
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 5.8e-100 369.0 533 49.2
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.7e-99 367.5 550 47.5
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 2.9e-99 366.7 540 50.2
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 3.8e-99 366.3 575 47.7
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 6.4e-99 365.5 533 47.7
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 1.1e-98 364.8 479 52.8
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.4e-98 364.4 529 53.9
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 9.3e-98 361.7 575 48.5
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 1.2e-97 361.3 464 51.9
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 3.5e-97 359.8 545 49.4
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 1.8e-96 357.5 472 56.4
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 5.1e-96 355.9 539 49.5
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 5.1e-96 355.9 528 49.2
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 2.5e-95 353.6 536 46.8
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 9.6e-95 351.7 492 56.7
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 2.1e-94 350.5 530 50.2
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 8.2e-94 348.6 514 50.0
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 8.2e-94 348.6 552 46.6
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 1.4e-93 347.8 542 51.5
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 1.8e-93 347.4 516 52.3
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 3.8e-91 339.7 533 49.5
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 1.1e-90 338.2 533 49.3
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 5.5e-90 335.9 527 46.9
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 9.3e-90 335.1 529 45.0
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 1.8e-88 330.9 524 46.4
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 5.1e-88 329.3 521 49.1
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 1.5e-87 327.8 537 48.2
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 7.4e-87 325.5 532 51.3
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 1.3e-86 324.7 464 51.9
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 1.4e-85 321.2 464 51.7
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 3.6e-81 306.6 495 53.5
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 1.8e-80 304.3 535 44.3
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 2.0e-79 300.8 540 42.6
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 2.0e-79 300.8 583 47.9
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 9.7e-79 298.5 437 46.2
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.0e-75 286.2 319 62.7
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.4e-74 284.6 309 57.3
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.9e-74 284.3 304 55.6
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 2.5e-74 283.9 526 43.9
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 1.0e-72 278.5 297 67.7
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.1e-71 275.0 449 42.8
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 3.9e-64 250.0 300 53.3
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 3.3e-63 246.9 474 40.5
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 5.3e-61 239.6 581 35.1
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 4.5e-60 236.5 465 42.2
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 3.8e-59 233.4 300 51.7
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.6e-57 228.0 518 40.0
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 8.8e-56 222.2 550 42.4
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 1.4e-53 214.9 306 51.6
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 7.0e-45 186.0 392 37.8
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 3.6e-41 173.7 533 38.8
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 1.8e-40 171.4 155 60.0
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.0e-35 155.6 186 55.4
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.1e-33 147.9 163 55.2
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 3.1e-32 144.1 129 66.7
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.1e-29 135.6 160 55.0
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.5e-28 130.6 72 87.5
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 1.0e-27 129.0 198 40.9
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 2.3e-27 127.9 203 50.7
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.9e-26 124.8 72 86.1
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 1.1e-18 99.0 93 62.4
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 7.3e-18 96.3 165 39.4
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.6e-17 95.1 95 51.6
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 5.2e-16 90.1 433 27.5
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 1.5e-15 88.6 148 39.9
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 1.7e-14 85.1 121 43.8
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-11 75.1 84 38.1
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 1.2e-09 68.9 464 25.6
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 2.8e-09 67.8 85 34.1
Nn2g15616 Nelumbo nucifera HOM05D005806 ORTHO05D007119 5.2e-08 63.5 53 62.3


User provided reference genes

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