Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 0.0e+00 2687.9 1407 100.0
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 0.0e+00 2062.3 1417 78.1
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 0.0e+00 1893.6 1241 80.1
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 0.0e+00 1828.9 1232 77.5
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 0.0e+00 1782.7 1413 67.9
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1759.2 1416 67.9
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 0.0e+00 1756.9 1422 67.4
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 0.0e+00 1735.7 1425 65.8
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 0.0e+00 1712.2 1415 64.9
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1703.3 1428 65.7
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 0.0e+00 1688.3 1415 66.6
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1682.5 1429 64.5
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 0.0e+00 1677.5 1400 65.9
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1672.9 1421 65.2
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1669.4 1421 65.2
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1653.6 1429 63.9
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 0.0e+00 1648.6 1421 64.0
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 0.0e+00 1645.9 1277 68.4
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 0.0e+00 1606.7 1409 63.4
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 0.0e+00 1605.1 1410 62.3
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 0.0e+00 1598.6 1414 62.2
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 0.0e+00 1589.7 1418 61.3
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 0.0e+00 1577.0 1418 62.0
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 0.0e+00 1535.8 1226 67.7
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1530.0 1226 67.3
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 0.0e+00 1503.4 1412 59.9
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 0.0e+00 1502.3 1412 58.5
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 0.0e+00 1494.9 1428 58.5
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 0.0e+00 1472.2 1438 57.4
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 0.0e+00 1454.9 1435 56.2
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 0.0e+00 1439.1 1417 56.7
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1439.1 1418 55.9
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 0.0e+00 1436.4 1418 55.8
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 0.0e+00 1430.2 1435 55.9
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 0.0e+00 1427.2 1233 62.9
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 1426.0 1429 55.8
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 0.0e+00 1412.9 1410 56.0
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 0.0e+00 1401.3 1088 68.6
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 0.0e+00 1401.0 1453 54.8
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 0.0e+00 1374.0 1397 54.7
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 0.0e+00 1363.2 1326 56.5
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 0.0e+00 1358.6 1436 52.8
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 0.0e+00 1358.2 1338 56.1
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 0.0e+00 1357.0 1436 53.9
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 1353.2 1430 54.1
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 0.0e+00 1350.1 1406 54.4
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 0.0e+00 1347.8 1374 54.3
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 0.0e+00 1341.6 1367 55.5
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 0.0e+00 1327.4 1460 51.7
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 0.0e+00 1325.5 1367 55.2
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 0.0e+00 1320.8 1349 53.8
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 0.0e+00 1320.4 1433 52.0
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 0.0e+00 1279.2 1029 66.6
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 0.0e+00 1263.1 1414 53.3
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 0.0e+00 1254.6 1133 61.3
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 0.0e+00 1212.2 1363 50.5
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 0.0e+00 1196.0 1062 63.1
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 0.0e+00 1194.5 1204 56.2
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 0.0e+00 1176.0 1235 54.1
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 0.0e+00 1168.3 1175 55.8
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 0.0e+00 1151.7 1035 60.4
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 0.0e+00 1145.6 1032 60.4
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 0.0e+00 1142.9 1139 56.7
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 0.0e+00 1095.5 1425 47.2
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 0.0e+00 1082.8 871 67.7
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 1.6e-301 1040.0 852 66.7
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 2.2e-290 1003.0 1415 44.2
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 1.3e-279 967.2 1366 43.5
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 6.9e-244 848.6 1430 39.1
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 6.7e-239 832.0 993 50.7
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 2.4e-236 823.5 1339 39.7
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 1.8e-223 780.8 705 61.6
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 4.5e-219 766.1 717 61.1
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 3.7e-205 719.9 896 48.7
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 3.0e-194 683.7 638 60.8
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 2.4e-188 664.1 1433 34.7
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 3.5e-187 660.2 1508 34.3
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 3.3e-185 653.7 1338 35.9
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 4.7e-184 649.8 1361 35.6
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 4.1e-143 513.8 662 47.3
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 7.2e-124 449.9 490 50.6
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 1.7e-109 402.1 1283 29.1
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 5.2e-98 364.0 268 71.3
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 1.2e-89 336.3 341 58.1
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 4.9e-88 330.9 420 46.7
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 1.5e-84 319.3 290 58.3
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 7.8e-70 270.4 291 55.7
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 9.6e-60 236.9 263 51.7
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 2.7e-54 218.8 202 59.4
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 9.0e-42 177.2 120 77.5
HanXRQChr03g0089471 Helianthus annuus HOM05D007614 ORTHO05D009538 1.3e-37 163.3 288 37.5
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 6.2e-35 154.5 104 76.9
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 1.1e-26 127.1 105 62.9
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 3.0e-21 109.0 146 49.3
Actinidia14287 Actinidia chinensis HOM05D065619 ORTHO05D037991 7.2e-15 87.8 87 56.3
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 6.1e-14 84.7 277 26.4
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 8.8e-13 80.9 113 43.4
Os05g0314700 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 9.4e-07 60.8 111 38.7


User provided reference genes

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