Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p009884 Quercus lobata HOM05D003565 ORTHO05D003943 1.9e-74 282.3 137 100.0
QL06p009948 Quercus lobata HOM05D003565 ORTHO05D003943 9.9e-63 243.4 137 89.1
QL06p009891 Quercus lobata HOM05D003565 ORTHO05D003943 1.6e-60 236.1 137 82.5
QL06p009834 Quercus lobata HOM05D003565 ORTHO05D003943 1.3e-33 146.7 143 54.5
QL06p009817 Quercus lobata HOM05D003565 ORTHO05D003943 1.2e-20 103.6 145 44.1
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 2.1e-20 102.8 140 38.6
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 8.0e-20 100.9 140 37.9
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 8.8e-19 97.4 144 36.1
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 2.8e-17 92.4 145 35.9
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 3.7e-17 92.0 144 39.6
Lalb_Chr15g0083411 Lupinus albus HOM05D003565 ORTHO05D003943 3.7e-17 92.0 142 38.7
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 8.3e-17 90.9 140 37.1
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 1.8e-16 89.7 119 37.0
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 5.3e-16 88.2 142 39.4
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 1.2e-15 87.0 116 38.8
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 1.2e-15 87.0 142 37.3
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 3.5e-15 85.5 141 34.8
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 7.7e-15 84.3 120 38.3
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 1.0e-14 84.0 126 35.7
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 1.3e-14 83.6 143 33.6
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 2.2e-14 82.8 142 37.3
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 6.5e-14 81.3 144 38.2
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 6.5e-14 81.3 144 38.2
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 6.5e-14 81.3 118 34.7
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 8.5e-14 80.9 121 39.7
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 8.5e-14 80.9 130 36.9
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.1e-13 80.5 144 38.2
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.1e-13 80.5 144 39.6
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 1.1e-13 80.5 145 37.9
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 1.1e-13 80.5 144 34.0
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 2.5e-13 79.3 145 37.2
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 2.5e-13 79.3 142 38.7
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 2.5e-13 79.3 144 36.1
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 3.2e-13 79.0 139 38.8
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 5.5e-13 78.2 135 33.3
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 7.2e-13 77.8 139 36.7
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 7.2e-13 77.8 116 34.5
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 9.4e-13 77.4 146 37.0
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.2e-12 77.0 126 37.3
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 2.1e-12 76.3 135 32.6
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.7e-12 75.9 139 39.6
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 2.7e-12 75.9 143 34.3
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 3.6e-12 75.5 135 32.6
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 4.7e-12 75.1 119 35.3
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 8.0e-12 74.3 140 37.1
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 8.0e-12 74.3 140 37.1
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 8.0e-12 74.3 118 35.6
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.8e-11 73.2 143 40.6
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 3.0e-11 72.4 141 36.9
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 5.2e-11 71.6 129 34.9
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 6.8e-11 71.2 122 31.1
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 6.8e-11 71.2 122 31.1
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.2e-10 70.5 130 34.6
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 2.0e-10 69.7 142 33.8
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 2.0e-10 69.7 143 35.7
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 2.6e-10 69.3 143 32.2
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 4.4e-10 68.6 136 33.8
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 5.7e-10 68.2 144 35.4
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 9.8e-10 67.4 146 32.2
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 1.3e-09 67.0 138 35.5
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 1.3e-09 67.0 132 34.1
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 1.7e-09 66.6 117 32.5
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.2e-09 66.2 130 33.8
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 2.2e-09 66.2 117 34.2
RcHm_v2.0_Chr4g0422901 Rosa chinensis HOM05D003565 ORTHO05D003943 1.1e-08 63.9 132 34.1
arahy.Tifrunner.gnm1.ann1.Q570SP Arachis hypogaea HOM05D003565 ORTHO05D003943 1.4e-08 63.5 96 36.5
arahy.Tifrunner.gnm1.ann1.VE1P60 Arachis hypogaea HOM05D003565 ORTHO05D003943 1.4e-08 63.5 96 36.5
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 1.4e-08 63.5 144 27.8
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.8e-08 63.2 148 32.4
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 3.1e-08 62.4 117 31.6
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 4.1e-08 62.0 134 30.6
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 4.1e-08 62.0 135 30.4
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.4e-08 61.6 143 33.6
FAN17G0998 Fragaria x ananassa HOM05D003565 ORTHO05D003943 7.0e-08 61.2 141 29.8
AL3G29590 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 1.6e-07 60.1 115 31.3
Eucgr.H03941 Eucalyptus grandis HOM05D003565 ORTHO05D003943 1.6e-07 60.1 119 32.8
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 2.0e-07 59.7 140 29.3
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 3.5e-07 58.9 136 29.4
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 2.9e-06 55.8 89 36.0
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 5.0e-06 55.1 136 31.6
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 6.6e-06 54.7 137 31.4


User provided reference genes

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